RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 RTN1Q16799 776 aa18.7■□□□□ 0.58
CLDN11-208ENST00000488989 GMCL1P1Q8NEA9 526 aa18.7■□□□□ 0.58
CLDN11-208ENST00000488989 ZKSCAN4Q969J2 545 aaPredicted RBP18.7■□□□□ 0.58
CLDN11-208ENST00000488989 LLPHQ9BRT6 129 aaKnown RBP18.7■□□□□ 0.58
CLDN11-208ENST00000488989 WDR18Q9BV38 432 aa18.7■□□□□ 0.58
CLDN11-208ENST00000488989 RBM28Q9NW13 759 aaKnown RBP18.7■□□□□ 0.58
CLDN11-208ENST00000488989 NAP1L2Q9ULW6 460 aaPredicted RBP18.7■□□□□ 0.58
CLDN11-208ENST00000488989 CCDC196A0A1B0GTZ2 297 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 A0A1W2PRG0 241 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 DHX16O60231 1041 aaKnown RBP18.69■□□□□ 0.58
CLDN11-208ENST00000488989 RXRAP19793 462 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 CDC27P30260 824 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 FKBP1BP68106 108 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 NTRK3Q16288 839 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 LDLRAD1Q5T700 205 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 ARMC9Q7Z3E5 817 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 RAB11FIP4Q86YS3 637 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 LRRC47Q8N1G4 583 aaKnown RBP18.69■□□□□ 0.58
CLDN11-208ENST00000488989 SMARCC2Q8TAQ2 1214 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 NCOA5Q9HCD5 579 aaKnown RBP18.69■□□□□ 0.58
CLDN11-208ENST00000488989 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
CLDN11-208ENST00000488989 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.69■□□□□ 0.58
CLDN11-208ENST00000488989 SNCAIPQ9Y6H5 919 aa18.69■□□□□ 0.58
CLDN11-208ENST00000488989 CTDNEP1O95476 244 aa18.68■□□□□ 0.58
CLDN11-208ENST00000488989 PDHBP11177 359 aa18.68■□□□□ 0.58
CLDN11-208ENST00000488989 PTPRAP18433 802 aa18.68■□□□□ 0.58
CLDN11-208ENST00000488989 ADD1P35611 737 aaKnown RBP18.68■□□□□ 0.58
CLDN11-208ENST00000488989 PRKG1Q13976 671 aa18.68■□□□□ 0.58
CLDN11-208ENST00000488989 ANKRD13AQ8IZ07 590 aa18.68■□□□□ 0.58
CLDN11-208ENST00000488989 NSUN7Q8NE18 718 aaKnown RBP18.68■□□□□ 0.58
CLDN11-208ENST00000488989 CTCFLQ8NI51 663 aaPredicted RBP18.68■□□□□ 0.58
CLDN11-208ENST00000488989 ACER1Q8TDN7 264 aa18.68■□□□□ 0.58
CLDN11-208ENST00000488989 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
CLDN11-208ENST00000488989 PICK1Q9NRD5 415 aa18.68■□□□□ 0.58
CLDN11-208ENST00000488989 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.68■□□□□ 0.58
CLDN11-208ENST00000488989 BAZ2BQ9UIF8 2168 aaKnown RBP18.68■□□□□ 0.58
CLDN11-208ENST00000488989 PALM3A6NDB9 673 aaPredicted RBP18.67■□□□□ 0.58
CLDN11-208ENST00000488989 KIF5BP33176 963 aa18.67■□□□□ 0.58
CLDN11-208ENST00000488989 ECE1P42892 770 aa18.67■□□□□ 0.58
CLDN11-208ENST00000488989 ATP2B2Q01814 1243 aa18.67■□□□□ 0.58
CLDN11-208ENST00000488989 FMR1Q06787 632 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLDN11-208ENST00000488989 VGLL4Q14135 290 aa18.67■□□□□ 0.58
CLDN11-208ENST00000488989 DCAF4Q8WV16 495 aa18.67■□□□□ 0.58
CLDN11-208ENST00000488989 AS3MTQ9HBK9 375 aa18.67■□□□□ 0.58
CLDN11-208ENST00000488989 MAD2L2Q9UI95 211 aa18.67■□□□□ 0.58
CLDN11-208ENST00000488989 F5H6K3 240 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 IFNAR1P17181 557 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 GNAQP50148 359 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 KLRC3Q07444 240 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 FUT2Q10981 343 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 ASPRV1Q53RT3 343 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 CPLX2Q6PUV4 134 aaKnown RBP18.66■□□□□ 0.58
CLDN11-208ENST00000488989 TMTC3Q6ZXV5 915 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 MOB2Q70IA6 237 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 CCDC84Q86UT8 332 aaPredicted RBP18.66■□□□□ 0.58
CLDN11-208ENST00000488989 CCDC144CPQ8IYA2 1237 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 GMCL1Q96IK5 515 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 KIAA1683Q9H0B3 1180 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 CSADQ9Y600 493 aa18.66■□□□□ 0.58
CLDN11-208ENST00000488989 CDKL5O76039 1030 aa18.65■□□□□ 0.58
CLDN11-208ENST00000488989 NDUFB10O96000 172 aa18.65■□□□□ 0.58
CLDN11-208ENST00000488989 HSP90AA1P07900 732 aaKnown RBP18.65■□□□□ 0.58
CLDN11-208ENST00000488989 SMARCA1P28370 1054 aa18.65■□□□□ 0.58
CLDN11-208ENST00000488989 SLFN13Q68D06 897 aa18.65■□□□□ 0.58
CLDN11-208ENST00000488989 ZNF280CQ8ND82 737 aa18.65■□□□□ 0.58
CLDN11-208ENST00000488989 GBA2Q9HCG7 927 aaPredicted RBP18.65■□□□□ 0.58
CLDN11-208ENST00000488989 CWC22Q9HCG8 908 aaKnown RBP18.65■□□□□ 0.58
CLDN11-208ENST00000488989 PASKQ96RG2 1323 aa18.65■□□□□ 0.58
CLDN11-208ENST00000488989 CPLX1O14810 134 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 CELF2O95319 508 aaKnown RBP18.64■□□□□ 0.57
CLDN11-208ENST00000488989 PARP1P09874 1014 aaKnown RBP18.64■□□□□ 0.57
CLDN11-208ENST00000488989 DDIT3P35638 169 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 HMGN5P82970 282 aaKnown RBP18.64■□□□□ 0.57
CLDN11-208ENST00000488989 ZNF543Q08ER8 600 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 TTLL12Q14166 644 aaPredicted RBP18.64■□□□□ 0.57
CLDN11-208ENST00000488989 GPATCH4Q5T3I0 446 aaKnown RBP18.64■□□□□ 0.57
CLDN11-208ENST00000488989 USP17L2Q6R6M4 530 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 NBPF11Q86T75 865 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 STAG2Q8N3U4 1231 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 LZTS2Q9BRK4 669 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 GOPCQ9HD26 462 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 SMC3Q9UQE7 1217 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 AFG3L2Q9Y4W6 797 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 PARP14Q460N5 1801 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 STK36Q9NRP7 1315 aa18.64■□□□□ 0.57
CLDN11-208ENST00000488989 LOC285556D6RIA3 1793 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 PTPDC1A2A3K4 754 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 SPDYE5A6NIY4 337 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 USP17L10C9JJH3 530 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 JAK2O60674 1132 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 PLEKHA8P1O95397 391 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 PPATQ06203 517 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 KIAA1755Q5JYT7 1200 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 CST9Q5W186 159 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 RASGRP2Q7LDG7 609 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 ERO1BQ86YB8 467 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 SRBD1Q8N5C6 995 aaKnown RBP18.63■□□□□ 0.57
CLDN11-208ENST00000488989 SMC1BQ8NDV3 1235 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms