RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 IGDCC4Q8TDY8 1250 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
CHD1L-208ENST00000488864 FAM151AQ8WW52 585 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 UBAC1Q9BSL1 405 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 DNAJC25Q9H1X3 360 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 CLSTN2Q9H4D0 955 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
CHD1L-208ENST00000488864 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 PCP11498 1178 aaKnown RBP15.33■□□□□ 0.04
CHD1L-208ENST00000488864 MMP14P50281 582 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 ANKRD1Q15327 319 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 RBM43Q6ZSC3 357 aaKnown RBP15.33■□□□□ 0.04
CHD1L-208ENST00000488864 MIGA2Q7L4E1 593 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 PGBD1Q96JS3 809 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 ANGEL1Q9UNK9 670 aaKnown RBP15.33■□□□□ 0.04
CHD1L-208ENST00000488864 A0A0U1RQG5 324 aaPredicted RBP15.32■□□□□ 0.04
CHD1L-208ENST00000488864 GOLGA6L4A6NEF3 574 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 SH2B2O14492 632 aaPredicted RBP15.32■□□□□ 0.04
CHD1L-208ENST00000488864 RXRAP19793 462 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 ARID5BQ14865 1188 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 SYCP1Q15431 976 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 TPD52L1Q16890 204 aaPredicted RBP15.32■□□□□ 0.04
CHD1L-208ENST00000488864 SHROOM1Q2M3G4 852 aaPredicted RBP15.32■□□□□ 0.04
CHD1L-208ENST00000488864 AGXT2Q9BYV1 514 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 TNKSO95271 1327 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 SHMT1P34896 483 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 ZNF165P49910 485 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 NFXL1Q6ZNB6 911 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 IQCA1Q86XH1 822 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 MYL10Q9BUA6 226 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 TRIM34Q9BYJ4 488 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 DEFB129Q9H1M3 183 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 ALDH8A1Q9H2A2 487 aaPredicted RBP15.32■□□□□ 0.04
CHD1L-208ENST00000488864 LY9Q9HBG7 655 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 ADARB2Q9NS39 739 aaKnown RBP15.32■□□□□ 0.04
CHD1L-208ENST00000488864 CLIP2Q9UDT6 1046 aa15.32■□□□□ 0.04
CHD1L-208ENST00000488864 KLF18A0A0U1RQI7 1052 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 CCT2P78371 535 aaKnown RBP15.31■□□□□ 0.04
CHD1L-208ENST00000488864 FKBP1CQ5VVH2 108 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 DLK2Q6UY11 383 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.31■□□□□ 0.04
CHD1L-208ENST00000488864 ENAHQ8N8S7 591 aaPredicted RBP15.31■□□□□ 0.04
CHD1L-208ENST00000488864 CHMP4CQ96CF2 233 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 TMEM87BQ96K49 555 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 ZSCAN10Q96SZ4 725 aaPredicted RBP15.31■□□□□ 0.04
CHD1L-208ENST00000488864 ZNF287Q9HBT7 754 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 DDX19AQ9NUU7 478 aaKnown RBP15.31■□□□□ 0.04
CHD1L-208ENST00000488864 ATRNL1Q5VV63 1379 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 ERICH2A1L162 156 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 PPFIA3O75145 1194 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 AKR1B1P15121 316 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 WTAPQ15007 396 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 SART3Q15020 963 aaKnown RBP15.31■□□□□ 0.04
CHD1L-208ENST00000488864 FAM83AQ86UY5 434 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 CLEC10AQ8IUN9 316 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 CCDC112Q8NEF3 446 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 ZNF592Q92610 1267 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 SCAND2PQ9GZW5 306 aaPredicted RBP15.31■□□□□ 0.04
CHD1L-208ENST00000488864 IL17RBQ9NRM6 502 aa15.31■□□□□ 0.04
CHD1L-208ENST00000488864 USP27XA6NNY8 438 aa15.3■□□□□ 0.04
CHD1L-208ENST00000488864 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
CHD1L-208ENST00000488864 PDCP20941 246 aa15.3■□□□□ 0.04
CHD1L-208ENST00000488864 TNNI2P48788 182 aa15.3■□□□□ 0.04
CHD1L-208ENST00000488864 TNFAIP1Q13829 316 aa15.3■□□□□ 0.04
CHD1L-208ENST00000488864 L3MBTL3Q96JM7 780 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-208ENST00000488864 EHD4Q9H223 541 aa15.3■□□□□ 0.04
CHD1L-208ENST00000488864 NCOA5Q9HCD5 579 aaKnown RBP15.3■□□□□ 0.04
CHD1L-208ENST00000488864 DDX41Q9UJV9 622 aaKnown RBP15.3■□□□□ 0.04
CHD1L-208ENST00000488864 PAXBP1Q9Y5B6 917 aa15.3■□□□□ 0.04
CHD1L-208ENST00000488864 MICU3Q86XE3 530 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.29■□□□□ 0.045e-6■□□□□ 10
CHD1L-208ENST00000488864 WDR19Q8NEZ3 1342 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 GOLGA8BA8MQT2 603 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 GDF11O95390 407 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 PDIA3P30101 505 aaKnown RBP15.29■□□□□ 0.04
CHD1L-208ENST00000488864 EPHX2P34913 555 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 SEC23AQ15436 765 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 EAPPQ56P03 285 aaPredicted RBP15.29■□□□□ 0.04
CHD1L-208ENST00000488864 ZNF771Q7L3S4 317 aaPredicted RBP15.29■□□□□ 0.04
CHD1L-208ENST00000488864 FOXP4Q8IVH2 680 aaPredicted RBP15.29■□□□□ 0.04
CHD1L-208ENST00000488864 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
CHD1L-208ENST00000488864 SWAP70Q9UH65 585 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 STX8Q9UNK0 236 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 ZC3H4Q9UPT8 1303 aaKnown RBP15.29■□□□□ 0.04
CHD1L-208ENST00000488864 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
CHD1L-208ENST00000488864 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
CHD1L-208ENST00000488864 JAK2O60674 1132 aa15.28■□□□□ 0.04
CHD1L-208ENST00000488864 IFIT1BQ5T764 474 aaKnown RBP15.28■□□□□ 0.04
CHD1L-208ENST00000488864 CEP135Q66GS9 1140 aa15.28■□□□□ 0.04
CHD1L-208ENST00000488864 ZNF526Q8TF50 670 aaPredicted RBP15.28■□□□□ 0.04
CHD1L-208ENST00000488864 TEPSINQ96N21 525 aa15.28■□□□□ 0.04
CHD1L-208ENST00000488864 PGAP2Q9UHJ9 254 aa15.28■□□□□ 0.04
CHD1L-208ENST00000488864 FZD1Q9UP38 647 aa15.28■□□□□ 0.04
CHD1L-208ENST00000488864 MTMR7Q9Y216 660 aa15.28■□□□□ 0.04
CHD1L-208ENST00000488864 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.28■□□□□ 0.04
CHD1L-208ENST00000488864 CCDC69A6NI79 296 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms