RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MYL10Q9BUA6 226 aa14.43□□□□□ -0.1
TRAIP-209ENST00000488860 TBC1D2Q9BYX2 928 aa14.43□□□□□ -0.1
TRAIP-209ENST00000488860 UNCXA6NJT0 531 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 RXRAP19793 462 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 LIFRP42702 1097 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 PPATQ06203 517 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 GRM1Q13255 1194 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 PPIL2Q13356 520 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 DGKZQ13574 1117 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 RGMBQ6NW40 437 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 SYNE3Q6ZMZ3 975 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 MICU3Q86XE3 530 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 SIAH1Q8IUQ4 282 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 ZNF654Q8IZM8 581 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 WDR18Q9BV38 432 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 GOPCQ9HD26 462 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 SLC12A7Q9Y666 1083 aa14.42□□□□□ -0.1
TRAIP-209ENST00000488860 USP17L10C9JJH3 530 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 IRF6O14896 467 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 CD2BP2O95400 341 aaKnown RBP14.41□□□□□ -0.1
TRAIP-209ENST00000488860 GJA5P36382 358 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 NOVP48745 357 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 HMGCS2P54868 508 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 STK3Q13188 491 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 CCDC96Q2M329 555 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 APOA5Q6Q788 366 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 RASAL3Q86YV0 1011 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 CCDC144CPQ8IYA2 1237 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 SPICE1Q8N0Z3 855 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 TMTC2Q8N394 836 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 ANKS1AQ92625 1134 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 AGXT2Q9BYV1 514 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 TSHZ2Q9NRE2 1034 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 BRPF3Q9ULD4 1205 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 TMX2Q9Y320 296 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 AFG3L2Q9Y4W6 797 aa14.41□□□□□ -0.1
TRAIP-209ENST00000488860 COL11A1P12107 1806 aaPredicted RBP14.41□□□□□ -0.1
TRAIP-209ENST00000488860 GOLGA8AA7E2F4 631 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 ZBTB43O43298 467 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 DDAH1O94760 285 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 NDUFB10O96000 172 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 SLFN13Q68D06 897 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 USP17L2Q6R6M4 530 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 GADL1Q6ZQY3 521 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 SGMS1Q86VZ5 419 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 KIAA1683Q9H0B3 1180 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 ALDH8A1Q9H2A2 487 aaPredicted RBP14.4□□□□□ -0.1
TRAIP-209ENST00000488860 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 TMOD4Q9NZQ9 345 aa14.4□□□□□ -0.1
TRAIP-209ENST00000488860 FRMPD2Q68DX3 1309 aaPredicted RBP14.4□□□□□ -0.1
TRAIP-209ENST00000488860 F5H6K3 240 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 LARGE1O95461 756 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 SLC10A3P09131 477 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 METAP2P50579 478 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAIP-209ENST00000488860 USP14P54578 494 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 BACE1P56817 501 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 KLRC3Q07444 240 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 SPRYD7Q5W111 196 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 HSCBQ8IWL3 235 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 FBXL16Q8N461 479 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 GMCL1P1Q8NEA9 526 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 MKL1Q969V6 931 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 NUP88Q99567 741 aaPredicted RBP14.39□□□□□ -0.11
TRAIP-209ENST00000488860 TPCN1Q9ULQ1 816 aa14.39□□□□□ -0.11
TRAIP-209ENST00000488860 C19orf81C9J6K1 198 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 CALM1P0DP23 149 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 CALM2P0DP24 149 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 CALM3P0DP25 149 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 ZBTB48P10074 688 aaPredicted RBP14.38□□□□□ -0.11
TRAIP-209ENST00000488860 PDHBP11177 359 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 SLC1A4P43007 532 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 MCM2P49736 904 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 CCT2P78371 535 aaKnown RBP14.38□□□□□ -0.11
TRAIP-209ENST00000488860 HTRA3P83110 453 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 SNAPC2Q13487 334 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 RTN1Q16799 776 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 KIAA1755Q5JYT7 1200 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 FAM83BQ5T0W9 1011 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 CYP4F22Q6NT55 531 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 CTCFLQ8NI51 663 aaPredicted RBP14.38□□□□□ -0.11
TRAIP-209ENST00000488860 DCAF4Q8WV16 495 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 EMILIN3Q9NT22 766 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 SYNPO2Q9UMS6 1093 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 LIMCH1Q9UPQ0 1083 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 KCNH4Q9UQ05 1017 aa14.38□□□□□ -0.11
TRAIP-209ENST00000488860 RLFQ13129 1914 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 A0A0G2JLL6 359 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 CXCL11O14625 94 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 PARP1P09874 1014 aaKnown RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 GOLGA8HP0CJ92 632 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 VCAM1P19320 739 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 PDIA3P30101 505 aaKnown RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 ANP32AP39687 249 aaKnown RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 IKQ13123 557 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 GRM4Q14833 912 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 SAMD1Q6SPF0 538 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 KCTD1Q719H9 257 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 PRRT2Q7Z6L0 340 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 LPAR1Q92633 364 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms