RNA–Protein interactions for RNA: ENST00000488601.6

POLR1C-208, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-208ENST00000488601 ZNF804BA4D1E1 1349 aa8.45□□□□□ -1.06
POLR1C-208ENST00000488601 CYP2C8P10632 490 aa8.44□□□□□ -1.06
POLR1C-208ENST00000488601 TNNT2P45379 298 aaPredicted RBP8.44□□□□□ -1.06
POLR1C-208ENST00000488601 TLE2Q04725 743 aa8.44□□□□□ -1.06
POLR1C-208ENST00000488601 CACNB2Q08289 660 aaPredicted RBP8.44□□□□□ -1.06
POLR1C-208ENST00000488601 BRICD5Q6PL45 260 aa8.44□□□□□ -1.06
POLR1C-208ENST00000488601 SCUBE3Q8IX30 993 aa8.44□□□□□ -1.06
POLR1C-208ENST00000488601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.44□□□□□ -1.06
POLR1C-208ENST00000488601 POP1Q99575 1024 aaKnown RBP8.44□□□□□ -1.06
POLR1C-208ENST00000488601 USB1Q9BQ65 265 aaKnown RBP8.44□□□□□ -1.06
POLR1C-208ENST00000488601 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
POLR1C-208ENST00000488601 PPP1R12CQ9BZL4 782 aa8.44□□□□□ -1.06
POLR1C-208ENST00000488601 ZC3H12CQ9C0D7 883 aaKnown RBP8.44□□□□□ -1.06
POLR1C-208ENST00000488601 SLC12A5Q9H2X9 1139 aa8.44□□□□□ -1.06
POLR1C-208ENST00000488601 CDV3Q9UKY7 258 aaKnown RBP8.44□□□□□ -1.06
POLR1C-208ENST00000488601 IGSF10Q6WRI0 2623 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 GBF1Q92538 1859 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.43□□□□□ -1.06
POLR1C-208ENST00000488601 USP17L3A6NCW0 530 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 USP17L4A6NCW7 530 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 MYOGP15173 224 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 CCND3P30281 292 aaPredicted RBP8.43□□□□□ -1.06
POLR1C-208ENST00000488601 GRB10Q13322 594 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 PPIL2Q13356 520 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 HLFQ16534 295 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 USP17L1Q7RTZ2 530 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 DCLK2Q8N568 766 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 RUNDC1Q96C34 613 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 BSDC1Q9NW68 430 aaPredicted RBP8.43□□□□□ -1.06
POLR1C-208ENST00000488601 TSR3Q9UJK0 312 aaKnown RBP8.43□□□□□ -1.06
POLR1C-208ENST00000488601 SALL2Q9Y467 1007 aaPredicted RBP8.43□□□□□ -1.06
POLR1C-208ENST00000488601 PCDHB3Q9Y5E6 796 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 IBTKQ9P2D0 1353 aaPredicted RBP8.43□□□□□ -1.06
POLR1C-208ENST00000488601 CEP295Q9C0D2 2601 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 UBR5O95071 2799 aaPredicted RBP8.43□□□□□ -1.06
POLR1C-208ENST00000488601 ITPR1Q14643 2758 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 KALRNO60229 2985 aa8.43□□□□□ -1.06
POLR1C-208ENST00000488601 C2CD3Q4AC94 2353 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 CFAP46Q8IYW2 2715 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 FBN2P35556 2912 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 PALM3A6NDB9 673 aaPredicted RBP8.42□□□□□ -1.06
POLR1C-208ENST00000488601 PRR5-ARHGAP8B1AHC4 643 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 C1QTNF9BB2RNN3 333 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 LPXNO60711 386 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 C1QTNF9P0C862 333 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 SOX11P35716 441 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 RABGGTBP53611 331 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 ARHGAP8P85298 464 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 ZNF365Q70YC5 407 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 TMC1Q8TDI8 760 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 WNT2BQ93097 391 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 THAP11Q96EK4 314 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 UCN2Q96RP3 112 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 HAUS7Q99871 368 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 CERS4Q9HA82 394 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 TNKSO95271 1327 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 PSME4Q14997 1843 aa8.42□□□□□ -1.06
POLR1C-208ENST00000488601 SPTAN1Q13813 2472 aaKnown RBP8.41□□□□□ -1.06
POLR1C-208ENST00000488601 EIF4E1BA6NMX2 242 aaKnown RBP8.41□□□□□ -1.06
POLR1C-208ENST00000488601 RBM25P49756 843 aaKnown RBP8.41□□□□□ -1.06
POLR1C-208ENST00000488601 SEMA3FQ13275 785 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 PPIGQ13427 754 aaKnown RBP eCLIP8.41□□□□□ -1.061e-7■■□□□ 12.2
POLR1C-208ENST00000488601 GRAPQ13588 217 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 MOGSQ13724 837 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 PSRC1Q6PGN9 363 aaPredicted RBP8.41□□□□□ -1.06
POLR1C-208ENST00000488601 UNQ6494/PRO21346Q6UXR6 183 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 AEBP1Q8IUX7 1158 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 GLIS3Q8NEA6 775 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 GRAPLQ8TC17 118 aaPredicted RBP8.41□□□□□ -1.06
POLR1C-208ENST00000488601 LPAR1Q92633 364 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 PCDHGC5Q9Y5F6 944 aa8.41□□□□□ -1.06
POLR1C-208ENST00000488601 WDFY3Q8IZQ1 3526 aa8.4□□□□□ -1.06
POLR1C-208ENST00000488601 HEG1Q9ULI3 1381 aa8.4□□□□□ -1.06
POLR1C-208ENST00000488601 H3BQ06 376 aaPredicted RBP8.4□□□□□ -1.06
POLR1C-208ENST00000488601 NR1I2O75469 434 aa8.4□□□□□ -1.06
POLR1C-208ENST00000488601 F12P00748 615 aaPredicted RBP8.4□□□□□ -1.06
POLR1C-208ENST00000488601 MFSD5Q6N075 450 aa8.4□□□□□ -1.06
POLR1C-208ENST00000488601 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
POLR1C-208ENST00000488601 TMEM105Q8N8V8 129 aa8.4□□□□□ -1.06
POLR1C-208ENST00000488601 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.4□□□□□ -1.06
POLR1C-208ENST00000488601 TBC1D16Q8TBP0 767 aa8.4□□□□□ -1.06
POLR1C-208ENST00000488601 BBC3Q96PG8 261 aaPredicted RBP8.4□□□□□ -1.06
POLR1C-208ENST00000488601 SNCAIPQ9Y6H5 919 aa8.4□□□□□ -1.06
POLR1C-208ENST00000488601 LRRC37AA6NMS7 1700 aa8.4□□□□□ -1.07
POLR1C-208ENST00000488601 LCHNA4D1U4 455 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 TIMP1P01033 207 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 JUNDP17535 347 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 EIF4G2P78344 907 aaKnown RBP eCLIP8.39□□□□□ -1.07
POLR1C-208ENST00000488601 C19orf57Q0VDD7 668 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 NR1H3Q13133 447 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 SLC44A5Q8NCS7 719 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 CYP2W1Q8TAV3 490 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 ARNTL2Q8WYA1 636 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 MTIF3Q9H2K0 278 aaKnown RBP8.39□□□□□ -1.07
POLR1C-208ENST00000488601 TMEM39AQ9NV64 488 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 MAP10Q9P2G4 905 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 TFIP11Q9UBB9 837 aaKnown RBP8.39□□□□□ -1.07
POLR1C-208ENST00000488601 FKBPLQ9UIM3 349 aa8.39□□□□□ -1.07
POLR1C-208ENST00000488601 UBR2Q8IWV8 1755 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms