RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ARID4AP29374 1257 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-213ENST00000488386 EPHX2P34913 555 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 EPS15P42566 896 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 EIF6P56537 245 aaKnown RBP7.56□□□□□ -1.2
CDHR3-213ENST00000488386 PCBP4P57723 403 aaKnown RBP7.56□□□□□ -1.2
CDHR3-213ENST00000488386 GPSM2P81274 684 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 TRIP4Q15650 581 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-213ENST00000488386 MAP1SQ66K74 1059 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-213ENST00000488386 SP8Q8IXZ3 490 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 NIM1KQ8IY84 436 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 ZSCAN1Q8NBB4 408 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-213ENST00000488386 STK31Q9BXU1 1019 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 OXCT2Q9BYC2 517 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-213ENST00000488386 HACL1Q9UJ83 578 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 NSFL1CQ9UNZ2 370 aaKnown RBP7.56□□□□□ -1.2
CDHR3-213ENST00000488386 KCNMB2Q9Y691 235 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 ADAMTSL1Q8N6G6 1762 aa7.56□□□□□ -1.2
CDHR3-213ENST00000488386 WTIPA6NIX2 430 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 YDJCA8MPS7 323 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 F6X3S4 739 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 H3BRB1 525 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 VAMP4O75379 141 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 BBOX1O75936 387 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 RAD17O75943 681 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 CELA2BP08218 269 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 EIF1AXP47813 144 aaKnown RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 CXCL9Q07325 125 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 SF3B3Q15393 1217 aaKnown RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 ECM1Q16610 540 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 ZNF468Q5VIY5 522 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 KSR2Q6VAB6 950 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 FCHSD1Q86WN1 690 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 ZBTB38Q8NAP3 1195 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 TMX4Q9H1E5 349 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 TUT1Q9H6E5 874 aaKnown RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 DBNDD1Q9H9R9 158 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 KCNQ5Q9NR82 932 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 CWC25Q9NXE8 425 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-213ENST00000488386 POLLQ9UGP5 575 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 GGA1Q9UJY5 639 aa7.55□□□□□ -1.2
CDHR3-213ENST00000488386 IQCA1LA6NCM1 817 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 NEURL1BA8MQ27 555 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 DDX58O95786 925 aaKnown RBP7.54□□□□□ -1.2
CDHR3-213ENST00000488386 PCCAP05165 728 aaPredicted RBP7.54□□□□□ -1.2
CDHR3-213ENST00000488386 ARAFP10398 606 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 NPR3P17342 541 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 INSM1Q01101 510 aaPredicted RBP7.54□□□□□ -1.2
CDHR3-213ENST00000488386 TRIM28Q13263 835 aaKnown RBP7.54□□□□□ -1.2
CDHR3-213ENST00000488386 SYT9Q86SS6 491 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 GPC2Q8N158 579 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 CCDC191Q8NCU4 936 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 GPR152Q8TDT2 470 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 GSX2Q9BZM3 304 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 EGFL7Q9UHF1 273 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 MTMR7Q9Y216 660 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 MYH3P11055 1940 aa7.54□□□□□ -1.2
CDHR3-213ENST00000488386 IL16Q14005 1332 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 SHISA8B8ZZ34 492 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 PDE8AO60658 829 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 ICMTO60725 284 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 EPB42P16452 691 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 GMPSP49915 693 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-213ENST00000488386 RPS8P62241 208 aaKnown RBP7.53□□□□□ -1.2
CDHR3-213ENST00000488386 KIAA2012Q0VF49 1180 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 DLK2Q6UY11 383 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 SLCO4C1Q6ZQN7 724 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 UBE3BQ7Z3V4 1068 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 KRT25Q7Z3Z0 450 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 LDHDQ86WU2 507 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 WDR63Q8IWG1 891 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
CDHR3-213ENST00000488386 SVOPQ8N4V2 548 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 BHMTQ93088 406 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 RTFDC1Q9BY42 306 aaPredicted RBP7.53□□□□□ -1.2
CDHR3-213ENST00000488386 GREM2Q9H772 168 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 PRR12Q9ULL5 1215 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 ZNRF3Q9ULT6 936 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 GNEQ9Y223 722 aaKnown RBP7.53□□□□□ -1.2
CDHR3-213ENST00000488386 IVNS1ABPQ9Y6Y0 642 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 SCN9AQ15858 1988 aa7.53□□□□□ -1.2
CDHR3-213ENST00000488386 PASKQ96RG2 1323 aa7.52□□□□□ -1.2
CDHR3-213ENST00000488386 RTL9Q8NET4 1388 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 TRAF5O00463 557 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 PSMD14O00487 310 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 ECE2O60344 883 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 UFL1O94874 794 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 ARHGEF15O94989 841 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 NFKB1P19838 968 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 CTSWP56202 376 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 NEXNQ0ZGT2 675 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 CCDC152Q4G0S7 254 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 NOM1Q5C9Z4 860 aaKnown RBP7.52□□□□□ -1.21
CDHR3-213ENST00000488386 CIAPIN1Q6FI81 312 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 CNTROBQ8N137 903 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 SUPT20HQ8NEM7 779 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 TBC1D16Q8TBP0 767 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 TRPM4Q8TD43 1214 aa7.52□□□□□ -1.21
CDHR3-213ENST00000488386 DNAAF4Q8WXU2 420 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms