RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 HABP4Q5JVS0 413 aaKnown RBP23.2■■□□□ 1.3
CD55-209ENST00000488171 DPF3Q92784 378 aa23.2■■□□□ 1.3
CD55-209ENST00000488171 CRBNQ96SW2 442 aa23.2■■□□□ 1.3
CD55-209ENST00000488171 HTATIP2Q9BUP3 242 aa23.2■■□□□ 1.3
CD55-209ENST00000488171 ARHGEF10LQ9HCE6 1279 aa23.2■■□□□ 1.3
CD55-209ENST00000488171 A0A0G2JMZ2 1700 aa23.2■■□□□ 1.3
CD55-209ENST00000488171 ZFYP08048 801 aaPredicted RBP23.19■■□□□ 1.3
CD55-209ENST00000488171 RGS2P41220 211 aa23.19■■□□□ 1.3
CD55-209ENST00000488171 COG2Q14746 738 aa23.19■■□□□ 1.3
CD55-209ENST00000488171 CCL14Q16627 93 aa23.19■■□□□ 1.3
CD55-209ENST00000488171 SBK1Q52WX2 424 aa23.19■■□□□ 1.3
CD55-209ENST00000488171 LPAR1Q92633 364 aa23.19■■□□□ 1.3
CD55-209ENST00000488171 APBA2Q99767 749 aa23.19■■□□□ 1.3
CD55-209ENST00000488171 TANGO6Q9C0B7 1094 aa23.19■■□□□ 1.3
CD55-209ENST00000488171 M0R2C6 588 aa23.18■■□□□ 1.3
CD55-209ENST00000488171 PRKAR2AP13861 404 aaKnown RBP23.18■■□□□ 1.3
CD55-209ENST00000488171 GIMAP6Q6P9H5 292 aa23.18■■□□□ 1.3
CD55-209ENST00000488171 TRMT44Q8IYL2 757 aaKnown RBP23.18■■□□□ 1.3
CD55-209ENST00000488171 VCPKMTQ9H867 229 aa23.18■■□□□ 1.3
CD55-209ENST00000488171 CWC22Q9HCG8 908 aaKnown RBP23.18■■□□□ 1.3
CD55-209ENST00000488171 HOXC10Q9NYD6 342 aa23.18■■□□□ 1.3
CD55-209ENST00000488171 ERC2O15083 957 aa23.17■■□□□ 1.3
CD55-209ENST00000488171 GPAA1O43292 621 aa23.17■■□□□ 1.3
CD55-209ENST00000488171 ZKSCAN1P17029 563 aaPredicted RBP23.17■■□□□ 1.3
CD55-209ENST00000488171 PTPREP23469 700 aa23.17■■□□□ 1.3
CD55-209ENST00000488171 MAP2K5Q13163 448 aa23.17■■□□□ 1.3
CD55-209ENST00000488171 SPICE1Q8N0Z3 855 aa23.17■■□□□ 1.3
CD55-209ENST00000488171 GREB1LQ9C091 1923 aaPredicted RBP23.17■■□□□ 1.3
CD55-209ENST00000488171 SH2D4AQ9H788 454 aa23.17■■□□□ 1.3
CD55-209ENST00000488171 EPB41L4AQ9HCS5 686 aaPredicted RBP23.17■■□□□ 1.3
CD55-209ENST00000488171 ROBO3Q96MS0 1386 aa23.16■■□□□ 1.3
CD55-209ENST00000488171 SALL3Q9BXA9 1300 aa23.16■■□□□ 1.3
CD55-209ENST00000488171 SLC15A5A6NIM6 579 aa23.16■■□□□ 1.3
CD55-209ENST00000488171 GLRX3O76003 335 aaKnown RBP23.16■■□□□ 1.3
CD55-209ENST00000488171 EEF2P13639 858 aaKnown RBP23.16■■□□□ 1.3
CD55-209ENST00000488171 CACNB2Q08289 660 aaPredicted RBP23.16■■□□□ 1.3
CD55-209ENST00000488171 WDR78Q5VTH9 848 aa23.16■■□□□ 1.3
CD55-209ENST00000488171 DIS3LQ8TF46 1054 aaKnown RBP23.16■■□□□ 1.3
CD55-209ENST00000488171 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.16■■□□□ 1.3
CD55-209ENST00000488171 PARP14Q460N5 1801 aa23.16■■□□□ 1.3
CD55-209ENST00000488171 MX1P20591 662 aa23.15■■□□□ 1.3
CD55-209ENST00000488171 GRB14Q14449 540 aa23.15■■□□□ 1.3
CD55-209ENST00000488171 ANKLE1Q8NAG6 615 aa23.15■■□□□ 1.3
CD55-209ENST00000488171 PAWRQ96IZ0 340 aaKnown RBP23.15■■□□□ 1.3
CD55-209ENST00000488171 MOV10L1Q9BXT6 1211 aaKnown RBP23.15■■□□□ 1.3
CD55-209ENST00000488171 KANSL2Q9H9L4 492 aa23.15■■□□□ 1.3
CD55-209ENST00000488171 COLQQ9Y215 455 aaPredicted RBP23.15■■□□□ 1.3
CD55-209ENST00000488171 WDR46O15213 610 aaKnown RBP23.14■■□□□ 1.3
CD55-209ENST00000488171 RASA1P20936 1047 aa23.14■■□□□ 1.3
CD55-209ENST00000488171 DSG3P32926 999 aa23.14■■□□□ 1.3
CD55-209ENST00000488171 MNX1P50219 401 aaPredicted RBP23.14■■□□□ 1.3
CD55-209ENST00000488171 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.3
CD55-209ENST00000488171 SEC62Q99442 399 aaKnown RBP23.14■■□□□ 1.3
CD55-209ENST00000488171 FLRT1Q9NZU1 646 aa23.14■■□□□ 1.3
CD55-209ENST00000488171 MINDY4BA8MYZ0 360 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 FLOT1O75955 427 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 GNAT2P19087 354 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 ATP2B2Q01814 1243 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 LRRFIP1Q32MZ4 808 aaKnown RBP23.14■■□□□ 1.29
CD55-209ENST00000488171 STK11IPQ8N1F8 1099 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 ATG4CQ96DT6 458 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 SPATC1LQ9H0A9 340 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 OGDHLQ9ULD0 1010 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 IVNS1ABPQ9Y6Y0 642 aa23.14■■□□□ 1.29
CD55-209ENST00000488171 ZNF236Q9UL36 1845 aa23.13■■□□□ 1.29
CD55-209ENST00000488171 HOXC6P09630 235 aa23.13■■□□□ 1.29
CD55-209ENST00000488171 CCND3P30281 292 aaPredicted RBP23.13■■□□□ 1.29
CD55-209ENST00000488171 NECAB2Q7Z6G3 386 aa23.13■■□□□ 1.29
CD55-209ENST00000488171 MB21D1Q8N884 522 aa23.13■■□□□ 1.29
CD55-209ENST00000488171 NPLOC4Q8TAT6 608 aa23.13■■□□□ 1.29
CD55-209ENST00000488171 FSD1Q9BTV5 496 aa23.13■■□□□ 1.29
CD55-209ENST00000488171 ALPK3Q96L96 1907 aa23.12■■□□□ 1.29
CD55-209ENST00000488171 PATL2C9JE40 543 aaKnown RBP23.12■■□□□ 1.29
CD55-209ENST00000488171 HDAC1Q13547 482 aaPredicted RBP23.12■■□□□ 1.29
CD55-209ENST00000488171 ANKRD45Q5TZF3 282 aa23.12■■□□□ 1.29
CD55-209ENST00000488171 SHCBP1Q8NEM2 672 aa23.12■■□□□ 1.29
CD55-209ENST00000488171 APPP05067 770 aa23.11■■□□□ 1.29
CD55-209ENST00000488171 TDO2P48775 406 aa23.11■■□□□ 1.29
CD55-209ENST00000488171 ZMYM1Q5SVZ6 1142 aa23.11■■□□□ 1.29
CD55-209ENST00000488171 IFNL3Q8IZI9 196 aa23.11■■□□□ 1.29
CD55-209ENST00000488171 MKNK2Q9HBH9 465 aa23.11■■□□□ 1.29
CD55-209ENST00000488171 GOPCQ9HD26 462 aa23.11■■□□□ 1.29
CD55-209ENST00000488171 ADAMTS5Q9UNA0 930 aa23.11■■□□□ 1.29
CD55-209ENST00000488171 IGHA2P01877 340 aa23.1■■□□□ 1.29
CD55-209ENST00000488171 ERCC3P19447 782 aa23.1■■□□□ 1.29
CD55-209ENST00000488171 LHX8Q68G74 356 aa23.1■■□□□ 1.29
CD55-209ENST00000488171 FBXO28Q9NVF7 368 aa23.1■■□□□ 1.29
CD55-209ENST00000488171 NR2E3Q9Y5X4 410 aa23.1■■□□□ 1.29
CD55-209ENST00000488171 STRNO43815 780 aa23.09■■□□□ 1.29
CD55-209ENST00000488171 EVI5O60447 810 aa23.09■■□□□ 1.29
CD55-209ENST00000488171 MFSD14CQ5VZR4 134 aa23.09■■□□□ 1.29
CD55-209ENST00000488171 SAMD1Q6SPF0 538 aaPredicted RBP23.09■■□□□ 1.29
CD55-209ENST00000488171 CHRDL2Q6WN34 429 aa23.09■■□□□ 1.29
CD55-209ENST00000488171 NBPF3Q9H094 633 aa23.09■■□□□ 1.29
CD55-209ENST00000488171 NYAP2Q9P242 653 aa23.09■■□□□ 1.29
CD55-209ENST00000488171 COL11A1P12107 1806 aaPredicted RBP23.09■■□□□ 1.29
CD55-209ENST00000488171 IGKV6D-41A0A0C4DH26 115 aa23.08■■□□□ 1.29
CD55-209ENST00000488171 ADORA2AP29274 412 aa23.08■■□□□ 1.29
CD55-209ENST00000488171 PLS1Q14651 629 aa23.08■■□□□ 1.29
CD55-209ENST00000488171 TMEM132BQ14DG7 1078 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms