RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 NMT2O60551 498 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 CELF2O95319 508 aaKnown RBP12.88□□□□□ -0.35
HDLBP-242ENST00000488013 PTPRAP18433 802 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 SMARCA1P28370 1054 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 INPP5BP32019 993 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 ATP2B2Q01814 1243 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 PPATQ06203 517 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 APOBRQ0VD83 1088 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 TROAPQ12815 778 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 GPATCH4Q5T3I0 446 aaKnown RBP12.88□□□□□ -0.35
HDLBP-242ENST00000488013 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 ERO1BQ86YB8 467 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 FANCBQ8NB91 859 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 ZNF280CQ8ND82 737 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 FEZ1Q99689 392 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 KIAA1683Q9H0B3 1180 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
HDLBP-242ENST00000488013 NAV1Q8NEY1 1877 aa12.88□□□□□ -0.35
HDLBP-242ENST00000488013 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 NID2Q14112 1375 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 CUL4AQ13619 759 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 VGLL4Q14135 290 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 RRP1BQ14684 758 aaKnown RBP12.87□□□□□ -0.35
HDLBP-242ENST00000488013 ME3Q16798 604 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 RTN1Q16799 776 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 ASPRV1Q53RT3 343 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-242ENST00000488013 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 NUP133Q8WUM0 1156 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 GTF3C6Q969F1 213 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 GMCL1Q96IK5 515 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
HDLBP-242ENST00000488013 CWC22Q9HCG8 908 aaKnown RBP12.87□□□□□ -0.35
HDLBP-242ENST00000488013 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 ZHX2Q9Y6X8 837 aa12.87□□□□□ -0.35
HDLBP-242ENST00000488013 FOCADQ5VW36 1801 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 SPDYE5A6NIY4 337 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 F5H6K3 240 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 TRAF5O00463 557 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 CXCL11O14625 94 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
HDLBP-242ENST00000488013 SNHG28P0DPA3 235 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 SLC1A4P43007 532 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 BACE1P56817 501 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 HMGN5P82970 282 aaKnown RBP12.86□□□□□ -0.35
HDLBP-242ENST00000488013 KLRC3Q07444 240 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 ZNF784Q8NCA9 323 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-242ENST00000488013 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 ZKSCAN4Q969J2 545 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-242ENST00000488013 SLC10A4Q96EP9 437 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-242ENST00000488013 SSC5DA1L4H1 1573 aa12.86□□□□□ -0.35
HDLBP-242ENST00000488013 LAMA4Q16363 1823 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
HDLBP-242ENST00000488013 SLURP2P0DP57 97 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 PDHBP11177 359 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 PPIL2Q13356 520 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 PRKG1Q13976 671 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 COL9A3Q14050 684 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-242ENST00000488013 GRM4Q14833 912 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 SLFN13Q68D06 897 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 POTEHQ6S545 545 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 NOL8Q76FK4 1167 aaKnown RBP12.85□□□□□ -0.35
HDLBP-242ENST00000488013 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 TRIM22Q8IYM9 498 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
HDLBP-242ENST00000488013 WASF1Q92558 559 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 TMOD4Q9NZQ9 345 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 HPS5Q9UPZ3 1129 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 SNCAIPQ9Y6H5 919 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 PASKQ96RG2 1323 aa12.85□□□□□ -0.35
HDLBP-242ENST00000488013 ECM29Q5VYK3 1845 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 PLA2G6O60733 806 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 PDCP20941 246 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 JAG1P78504 1218 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
HDLBP-242ENST00000488013 TRAF1Q13077 416 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 SPP2Q13103 211 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
HDLBP-242ENST00000488013 FAM177A1Q8N128 213 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-242ENST00000488013 RGS22Q8NE09 1264 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 HHIPL1Q96JK4 782 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 C12orf42Q96LP6 360 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 PNMA2Q9UL42 364 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 LAMB1P07942 1786 aa12.84□□□□□ -0.35
HDLBP-242ENST00000488013 PALM3A6NDB9 673 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-242ENST00000488013 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 WDR46O15213 610 aaKnown RBP12.83□□□□□ -0.36
HDLBP-242ENST00000488013 NDUFB10O96000 172 aa12.83□□□□□ -0.36
HDLBP-242ENST00000488013 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-242ENST00000488013 FDX1P10109 184 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms