RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 GOPCQ9HD26 462 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 TMOD4Q9NZQ9 345 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 STX8Q9UNK0 236 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 THSD7BQ9C0I4 1608 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 ERICH2A1L162 156 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 IFIT3O14879 490 aaKnown RBP15.65■□□□□ 0.1
COL4A6-207ENST00000487645 PRC1O43663 620 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 TOP1P11387 765 aaKnown RBP15.65■□□□□ 0.1
COL4A6-207ENST00000487645 HMGCS2P54868 508 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 SEC23AQ15436 765 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 OTUD7BQ6GQQ9 843 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 TMTC2Q8N394 836 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 ENAHQ8N8S7 591 aaPredicted RBP15.65■□□□□ 0.1
COL4A6-207ENST00000487645 IGDCC4Q8TDY8 1250 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 BRI3BPQ8WY22 251 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 LPAR1Q92633 364 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 JAKMIP1Q96N16 626 aaKnown RBP15.65■□□□□ 0.1
COL4A6-207ENST00000487645 ZIC5Q96T25 663 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 ZSWIM6Q9HCJ5 1215 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 ZCCHC17Q9NP64 241 aaKnown RBP15.65■□□□□ 0.1
COL4A6-207ENST00000487645 TNKSO95271 1327 aa15.65■□□□□ 0.1
COL4A6-207ENST00000487645 F5H6K3 240 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 RBM25P49756 843 aaKnown RBP15.64■□□□□ 0.09
COL4A6-207ENST00000487645 ANTXR2P58335 489 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 KLRC3Q07444 240 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 BLOC1S2Q6QNY1 142 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 GADL1Q6ZQY3 521 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 CHST3Q7LGC8 479 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 ANKRD23Q86SG2 305 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 IFNL1Q8IU54 200 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 GMCL1P1Q8NEA9 526 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 PTPN18Q99952 460 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 TMEM47Q9BQJ4 181 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 C22orf23Q9BZE7 217 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 AGTPBP1Q9UPW5 1226 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 SLC45A1Q9Y2W3 748 aa15.64■□□□□ 0.09
COL4A6-207ENST00000487645 CASTP20810 708 aaKnown RBP15.63■□□□□ 0.09
COL4A6-207ENST00000487645 HOXA7P31268 230 aaPredicted RBP15.63■□□□□ 0.09
COL4A6-207ENST00000487645 LIFRP42702 1097 aa15.63■□□□□ 0.09
COL4A6-207ENST00000487645 PABPC4Q13310 644 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL4A6-207ENST00000487645 WTAPQ15007 396 aa15.63■□□□□ 0.09
COL4A6-207ENST00000487645 ZYXQ15942 572 aaKnown RBP15.63■□□□□ 0.09
COL4A6-207ENST00000487645 TMEM67Q5HYA8 995 aa15.63■□□□□ 0.09
COL4A6-207ENST00000487645 IFIT1BQ5T764 474 aaKnown RBP15.63■□□□□ 0.09
COL4A6-207ENST00000487645 GPAT2Q6NUI2 795 aa15.63■□□□□ 0.09
COL4A6-207ENST00000487645 RUFY3Q7L099 469 aa15.63■□□□□ 0.09
COL4A6-207ENST00000487645 FBXL16Q8N461 479 aa15.63■□□□□ 0.09
COL4A6-207ENST00000487645 BTBD19C9JJ37 291 aa15.62■□□□□ 0.09
COL4A6-207ENST00000487645 ALDH1A1P00352 501 aa15.62■□□□□ 0.09
COL4A6-207ENST00000487645 RPS6KB1P23443 525 aa15.62■□□□□ 0.09
COL4A6-207ENST00000487645 MAP2K1Q02750 393 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-207ENST00000487645 COL9A3Q14050 684 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-207ENST00000487645 KAT14Q9H8E8 782 aa15.62■□□□□ 0.09
COL4A6-207ENST00000487645 CYP46A1Q9Y6A2 500 aa15.62■□□□□ 0.09
COL4A6-207ENST00000487645 PCNTO95613 3336 aa15.62■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L15C9J2P7 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L13C9JLJ4 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L11C9JVI0 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L18D6R9N7 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L22D6RA61 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L17D6RBQ6 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L19D6RCP7 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L20D6RJB6 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 WDR46O15213 610 aaKnown RBP15.61■□□□□ 0.09
COL4A6-207ENST00000487645 NDUFB10O96000 172 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 USP17L24Q0WX57 530 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 KIAA1755Q5JYT7 1200 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 SLFN13Q68D06 897 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 LRRC47Q8N1G4 583 aaKnown RBP15.61■□□□□ 0.09
COL4A6-207ENST00000487645 JMYQ8N9B5 988 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 PNMA1Q8ND90 353 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 GMCL1Q96IK5 515 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 LY9Q9HBG7 655 aa15.61■□□□□ 0.09
COL4A6-207ENST00000487645 PARP14Q460N5 1801 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 PDHXO00330 501 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 IGF2BP3O00425 579 aaKnown RBP eCLIP15.6■□□□□ 0.09
COL4A6-207ENST00000487645 SH2B2O14492 632 aaPredicted RBP15.6■□□□□ 0.09
COL4A6-207ENST00000487645 VCAM1P19320 739 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 OSBPP22059 807 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 DGKZQ13574 1117 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 TREML2Q5T2D2 321 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 CATSPERGQ6ZRH7 1159 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 SPICE1Q8N0Z3 855 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 FAM43AQ8N2R8 423 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 IL27Q8NEV9 243 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 DCAF4Q8WV16 495 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 TBC1D32Q96NH3 1257 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 ALDH8A1Q9H2A2 487 aaPredicted RBP15.6■□□□□ 0.09
COL4A6-207ENST00000487645 PNMA3Q9UL41 463 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 RLFQ13129 1914 aa15.6■□□□□ 0.09
COL4A6-207ENST00000487645 RAD21O60216 631 aa15.59■□□□□ 0.09
COL4A6-207ENST00000487645 BMP3P12645 472 aa15.59■□□□□ 0.09
COL4A6-207ENST00000487645 CPA1P15085 419 aa15.59■□□□□ 0.09
COL4A6-207ENST00000487645 CATIPQ7Z7H3 387 aa15.59■□□□□ 0.09
COL4A6-207ENST00000487645 SGMS1Q86VZ5 419 aa15.59■□□□□ 0.09
COL4A6-207ENST00000487645 AGXT2Q9BYV1 514 aa15.59■□□□□ 0.09
COL4A6-207ENST00000487645 RPAP3Q9H6T3 665 aaPredicted RBP15.59■□□□□ 0.09
COL4A6-207ENST00000487645 CCDC69A6NI79 296 aa15.58■□□□□ 0.08
COL4A6-207ENST00000487645 CA12O43570 354 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms