RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 RABGAP1Q9Y3P9 1069 aa7.36□□□□□ -1.23
COL4A3-206ENST00000487633 MYH1P12882 1939 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 MROH7-TTC4A0A0A0MT08 1334 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 SALL1Q9NSC2 1324 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 GPR75-ASB3A0A0A6YYF3 556 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 USP17L10C9JJH3 530 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 ZNF865P0CJ78 1059 aaPredicted RBP7.35□□□□□ -1.23
COL4A3-206ENST00000487633 POU3F3P20264 500 aaPredicted RBP7.35□□□□□ -1.23
COL4A3-206ENST00000487633 ZEB1P37275 1124 aaPredicted RBP7.35□□□□□ -1.23
COL4A3-206ENST00000487633 CDK7P50613 346 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 MECOMQ03112 1051 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 TCF15Q12870 199 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 PUM3Q15397 648 aaKnown RBP7.35□□□□□ -1.23
COL4A3-206ENST00000487633 RAB30Q15771 203 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 AAK1Q2M2I8 961 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 KIAA1755Q5JYT7 1200 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 OLFML2BQ68BL8 750 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 PI16Q6UXB8 463 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 CATSPERGQ6ZRH7 1159 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 GJD3Q8N144 294 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 HLA-CQ95604 372 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 TOX2Q96NM4 488 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 WNT8AQ9H1J5 351 aa7.35□□□□□ -1.23
COL4A3-206ENST00000487633 CACNA1BQ00975 2339 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 POTEB3A0JP26 581 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 VAMP4O75379 141 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 PGK2P07205 417 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 IFIT1P09914 478 aaKnown RBP7.34□□□□□ -1.23
COL4A3-206ENST00000487633 ERCC3P19447 782 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 ACLYP53396 1101 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 CCL23P55773 120 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 EVX2Q03828 476 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 GRB10Q13322 594 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 PPIGQ13427 754 aaKnown RBP eCLIP7.34□□□□□ -1.23
COL4A3-206ENST00000487633 RASGRF1Q13972 1273 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 TTLL4Q14679 1199 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 POTEBQ6S5H4 581 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 TBC1D9Q6ZT07 1266 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 TMCO2Q7Z6W1 182 aaPredicted RBP7.34□□□□□ -1.23
COL4A3-206ENST00000487633 DPP9Q86TI2 863 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 FAM126BQ8IXS8 530 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 KLHDC9Q8NEP7 349 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 SH3RF3Q8TEJ3 882 aaPredicted RBP7.34□□□□□ -1.23
COL4A3-206ENST00000487633 MAML3Q96JK9 1138 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 TSPYL2Q9H2G4 693 aaPredicted RBP7.34□□□□□ -1.23
COL4A3-206ENST00000487633 AS3MTQ9HBK9 375 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 CWC22Q9HCG8 908 aaKnown RBP7.34□□□□□ -1.23
COL4A3-206ENST00000487633 IL23AQ9NPF7 189 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 STARD7Q9NQZ5 370 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 ABCF2Q9UG63 623 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 ZBTB21Q9ULJ3 1066 aa7.34□□□□□ -1.23
COL4A3-206ENST00000487633 ZFHX2Q9C0A1 2572 aaPredicted RBP7.33□□□□□ -1.24
COL4A3-206ENST00000487633 VPS13AQ96RL7 3174 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 ZNF521Q96K83 1311 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 KIF16BQ96L93 1317 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 SYNRGQ9UMZ2 1314 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 LCHNA4D1U4 455 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 C19orf81C9J6K1 198 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 APBB1O00213 710 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 ST18O60284 1047 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 FGBP02675 491 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 VCAM1P19320 739 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 TAP1Q03518 808 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 KCNA10Q16322 511 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 ARNTL2Q8WYA1 636 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 LPIN2Q92539 896 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 FAM163AQ96GL9 167 aaPredicted RBP7.33□□□□□ -1.24
COL4A3-206ENST00000487633 SCLYQ96I15 445 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
COL4A3-206ENST00000487633 COG5Q9UP83 839 aa7.33□□□□□ -1.24
COL4A3-206ENST00000487633 GRIN2DO15399 1336 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 KMT2BQ9UMN6 2715 aaPredicted RBP7.32□□□□□ -1.24
COL4A3-206ENST00000487633 TRIP12Q14669 1992 aaPredicted RBP7.32□□□□□ -1.24
COL4A3-206ENST00000487633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.32□□□□□ -1.24
COL4A3-206ENST00000487633 DCDC2CA8MYV0 355 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L15C9J2P7 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L13C9JLJ4 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L11C9JVI0 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L18D6R9N7 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L22D6RA61 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L17D6RBQ6 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L19D6RCP7 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L20D6RJB6 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 CTAGE5O15320 804 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 GH2P01242 217 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 CD4P01730 458 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 SLC5A1P13866 664 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 SSTR3P32745 418 aaPredicted RBP7.32□□□□□ -1.24
COL4A3-206ENST00000487633 GUCY1A2P33402 732 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L24Q0WX57 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 CCDC102BQ68D86 513 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 PSRC1Q6PGN9 363 aaPredicted RBP7.32□□□□□ -1.24
COL4A3-206ENST00000487633 USP17L2Q6R6M4 530 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 SAMD1Q6SPF0 538 aaPredicted RBP7.32□□□□□ -1.24
COL4A3-206ENST00000487633 SLC4A10Q6U841 1118 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 LBX2Q6XYB7 198 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 ADGRA1Q86SQ6 560 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 GDPD5Q8WTR4 605 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 C12orf42Q96LP6 360 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 TBC1D2Q9BYX2 928 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms