RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 KCNB2Q92953 911 aa15□□□□□ -0.01
PRDM2-208ENST00000487453 VCPKMTQ9H867 229 aa15□□□□□ -0.01
PRDM2-208ENST00000487453 EMILIN3Q9NT22 766 aa15□□□□□ -0.01
PRDM2-208ENST00000487453 AGTPBP1Q9UPW5 1226 aa15□□□□□ -0.01
PRDM2-208ENST00000487453 TESPA1A2RU30 521 aaPredicted RBP14.99□□□□□ -0.01
PRDM2-208ENST00000487453 BTBD19C9JJ37 291 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 HMGB1P09429 215 aaKnown RBP14.99□□□□□ -0.01
PRDM2-208ENST00000487453 TOP1P11387 765 aaKnown RBP14.99□□□□□ -0.01
PRDM2-208ENST00000487453 VCAM1P19320 739 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 CASTP20810 708 aaKnown RBP14.99□□□□□ -0.01
PRDM2-208ENST00000487453 PSMA5P28066 241 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 ANTXR2P58335 489 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 MOGSQ13724 837 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 COL9A3Q14050 684 aaPredicted RBP14.99□□□□□ -0.01
PRDM2-208ENST00000487453 TMEM67Q5HYA8 995 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 IFIT1BQ5T764 474 aaKnown RBP14.99□□□□□ -0.01
PRDM2-208ENST00000487453 OTUD7BQ6GQQ9 843 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 ANKRD23Q86SG2 305 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 FAM43AQ8N2R8 423 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 ENAHQ8N8S7 591 aaPredicted RBP14.99□□□□□ -0.01
PRDM2-208ENST00000487453 LPAR1Q92633 364 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 CHMP4CQ96CF2 233 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 PTPN18Q99952 460 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 TANGO6Q9C0B7 1094 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 KAT14Q9H8E8 782 aa14.99□□□□□ -0.01
PRDM2-208ENST00000487453 F5H6K3 240 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 PDHXO00330 501 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 CPA1P15085 419 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 TM4SF4P48230 202 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 FGD1P98174 961 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 MAP2K1Q02750 393 aaPredicted RBP14.98□□□□□ -0.01
PRDM2-208ENST00000487453 KLRC3Q07444 240 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 PABPC4Q13310 644 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRDM2-208ENST00000487453 WTAPQ15007 396 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 RCSD1Q6JBY9 416 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 DGKHQ86XP1 1220 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 TCEANC2Q96MN5 208 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 TTC14Q96N46 770 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 TMEM47Q9BQJ4 181 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 BEGAINQ9BUH8 593 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 LRRC2Q9BYS8 371 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 RPAP3Q9H6T3 665 aaPredicted RBP14.98□□□□□ -0.01
PRDM2-208ENST00000487453 SYNPO2Q9UMS6 1093 aa14.98□□□□□ -0.01
PRDM2-208ENST00000487453 WDR46O15213 610 aaKnown RBP14.97□□□□□ -0.01
PRDM2-208ENST00000487453 NDUFB10O96000 172 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 NOVP48745 357 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 ANAPC15P60006 121 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 IRX3P78415 501 aaPredicted RBP14.97□□□□□ -0.01
PRDM2-208ENST00000487453 TAF1CQ15572 869 aaPredicted RBP14.97□□□□□ -0.01
PRDM2-208ENST00000487453 KIAA1755Q5JYT7 1200 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 GPAT2Q6NUI2 795 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 DHX32Q7L7V1 743 aaKnown RBP14.97□□□□□ -0.01
PRDM2-208ENST00000487453 RASGRP2Q7LDG7 609 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 PNMA1Q8ND90 353 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 GMCL1P1Q8NEA9 526 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 MKL1Q969V6 931 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 TMEM87BQ96K49 555 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 NUP88Q99567 741 aaPredicted RBP14.97□□□□□ -0.01
PRDM2-208ENST00000487453 BACH2Q9BYV9 841 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 UPF3BQ9BZI7 483 aaKnown RBP14.97□□□□□ -0.01
PRDM2-208ENST00000487453 PNMA3Q9UL41 463 aa14.97□□□□□ -0.01
PRDM2-208ENST00000487453 WDR19Q8NEZ3 1342 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 SH2B2O14492 632 aaPredicted RBP14.96□□□□□ -0.01
PRDM2-208ENST00000487453 ALDH1A1P00352 501 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 OSBPP22059 807 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 RPS6KB1P23443 525 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 SEC23AQ15436 765 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 CCDC96Q2M329 555 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 FAM83BQ5T0W9 1011 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 SLFN13Q68D06 897 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
PRDM2-208ENST00000487453 NFXL1Q6ZNB6 911 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 SMCR8Q8TEV9 937 aaPredicted RBP14.96□□□□□ -0.01
PRDM2-208ENST00000487453 PARK7Q99497 189 aaKnown RBP14.96□□□□□ -0.01
PRDM2-208ENST00000487453 PARP14Q460N5 1801 aa14.96□□□□□ -0.01
PRDM2-208ENST00000487453 CCDC69A6NI79 296 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L15C9J2P7 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L13C9JLJ4 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L11C9JVI0 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L18D6R9N7 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L22D6RA61 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L17D6RBQ6 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L19D6RCP7 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L20D6RJB6 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 TRPA1O75762 1119 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 CYP2C8P10632 490 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 SLC1A4P43007 532 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 USP17L24Q0WX57 530 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 IKQ13123 557 aaPredicted RBP14.95□□□□□ -0.02
PRDM2-208ENST00000487453 RUFY3Q7L099 469 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 JMYQ8N9B5 988 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 LY9Q9HBG7 655 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 ZCCHC17Q9NP64 241 aaKnown RBP14.95□□□□□ -0.02
PRDM2-208ENST00000487453 GPHNQ9NQX3 736 aaPredicted RBP14.95□□□□□ -0.02
PRDM2-208ENST00000487453 RNF186Q9NXI6 227 aa14.95□□□□□ -0.02
PRDM2-208ENST00000487453 SLC45A1Q9Y2W3 748 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms