RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 ZSWIM8A7E2V4 1837 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 BCRP11274 1271 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 FAM47AQ5JRC9 791 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 KIAA1755Q5JYT7 1200 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 PPP4R3BQ5MIZ7 849 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 CASC1Q6TDU7 716 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 MFSD6Q6ZSS7 791 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 NKX2-3Q8TAU0 364 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 FEZ1Q99689 392 aa13.8□□□□□ -0.2
CLIP2-207ENST00000487447 RBM8AQ9Y5S9 174 aaKnown RBP13.8□□□□□ -0.2
CLIP2-207ENST00000487447 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
CLIP2-207ENST00000487447 TTLL1O95922 423 aa13.79□□□□□ -0.2
CLIP2-207ENST00000487447 CYP2C8P10632 490 aa13.79□□□□□ -0.2
CLIP2-207ENST00000487447 NECTIN1Q15223 517 aa13.79□□□□□ -0.2
CLIP2-207ENST00000487447 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
CLIP2-207ENST00000487447 CATSPERGQ6ZRH7 1159 aa13.79□□□□□ -0.2
CLIP2-207ENST00000487447 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
CLIP2-207ENST00000487447 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 WDR46O15213 610 aaKnown RBP13.78□□□□□ -0.2
CLIP2-207ENST00000487447 EPB41L2O43491 1005 aaKnown RBP13.78□□□□□ -0.2
CLIP2-207ENST00000487447 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
CLIP2-207ENST00000487447 FKTNO75072 461 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 OSBPP22059 807 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 GCLCP48506 637 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-207ENST00000487447 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 ZYXQ15942 572 aaKnown RBP13.78□□□□□ -0.2
CLIP2-207ENST00000487447 PKN2Q16513 984 aaKnown RBP13.78□□□□□ -0.2
CLIP2-207ENST00000487447 RCSD1Q6JBY9 416 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 KIAA1211Q6ZU35 1233 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 GMCL1P1Q8NEA9 526 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 ESR2Q92731 530 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 MORF4L1Q9UBU8 362 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 TAF6LQ9Y6J9 622 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 MYPNQ86TC9 1320 aa13.78□□□□□ -0.2
CLIP2-207ENST00000487447 COL11A1P12107 1806 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-207ENST00000487447 SP3Q02447 781 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 POTEEQ6S8J3 1075 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 STOX1Q6ZVD7 989 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 GTF3C2Q8WUA4 911 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-207ENST00000487447 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 TTC14Q96N46 770 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 KRT23Q9C075 422 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 RPAP3Q9H6T3 665 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-207ENST00000487447 GOPCQ9HD26 462 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 ANO2Q9NQ90 1003 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 CLIP2Q9UDT6 1046 aa13.77□□□□□ -0.21
CLIP2-207ENST00000487447 E7EWF7 191 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 F5H6K3 240 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 NMT2O60551 498 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 NDUFB10O96000 172 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 HERVK_113P62684 666 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 KLRC3Q07444 240 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 FAM110CQ1W6H9 321 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 RRP12Q5JTH9 1297 aaKnown RBP13.76□□□□□ -0.21
CLIP2-207ENST00000487447 KCNB2Q92953 911 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 ERO1AQ96HE7 468 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 GMCL1Q96IK5 515 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 P2RX7Q99572 595 aaKnown RBP13.76□□□□□ -0.21
CLIP2-207ENST00000487447 PLXNB2O15031 1838 aa13.76□□□□□ -0.21
CLIP2-207ENST00000487447 PDE4DIPQ5VU43 2346 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-207ENST00000487447 B4E1Z4 1266 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 SLC27A2O14975 620 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 KDM4AO75164 1064 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 IRX3P78415 501 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-207ENST00000487447 LACTBP83111 547 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-207ENST00000487447 CAP1Q01518 475 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 TSGA10IPQ3SY00 556 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 CREB3L3Q68CJ9 461 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 DGKHQ86XP1 1220 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 LRRC47Q8N1G4 583 aaKnown RBP13.75□□□□□ -0.21
CLIP2-207ENST00000487447 SMCR8Q8TEV9 937 aaPredicted RBP13.75□□□□□ -0.21
CLIP2-207ENST00000487447 ZSWIM5Q9P217 1185 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 CPA4Q9UI42 421 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 ADAMTS5Q9UNA0 930 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 ZNF236Q9UL36 1845 aa13.75□□□□□ -0.21
CLIP2-207ENST00000487447 TOP1P11387 765 aaKnown RBP13.74□□□□□ -0.21
CLIP2-207ENST00000487447 ATP2B2Q01814 1243 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 COG2Q14746 738 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 CCDC178Q5BJE1 867 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 FBXO46Q6PJ61 603 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-207ENST00000487447 IQCA1Q86XH1 822 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 MB21D2Q8IYB1 491 aaPredicted RBP13.74□□□□□ -0.21
CLIP2-207ENST00000487447 SPICE1Q8N0Z3 855 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 TMEM47Q9BQJ4 181 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 TOMM22Q9NS69 142 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 STX8Q9UNK0 236 aa13.74□□□□□ -0.21
CLIP2-207ENST00000487447 TNKSO95271 1327 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 PLA2G6O60733 806 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 CNMDO75829 334 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms