RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 SMCR8Q8TEV9 937 aaPredicted RBP13.74□□□□□ -0.21
LINC00996-202ENST00000486954 PTPN18Q99952 460 aa13.74□□□□□ -0.21
LINC00996-202ENST00000486954 ISY1Q9ULR0 285 aaKnown RBP13.74□□□□□ -0.21
LINC00996-202ENST00000486954 TNKSO95271 1327 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 WDR46O15213 610 aaKnown RBP13.73□□□□□ -0.21
LINC00996-202ENST00000486954 NMT2O60551 498 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 HSPA4P34932 840 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 DGKZQ13574 1117 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 MOGSQ13724 837 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 TREML2Q5T2D2 321 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 TTC14Q96N46 770 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
LINC00996-202ENST00000486954 ZKSCAN3Q9BRR0 538 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 TANGO6Q9C0B7 1094 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 EMILIN3Q9NT22 766 aa13.73□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L15C9J2P7 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L13C9JLJ4 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L11C9JVI0 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L18D6R9N7 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L22D6RA61 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L17D6RBQ6 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L19D6RCP7 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L20D6RJB6 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
LINC00996-202ENST00000486954 USP17L24Q0WX57 530 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 IFIT1BQ5T764 474 aaKnown RBP13.72□□□□□ -0.21
LINC00996-202ENST00000486954 GPAT2Q6NUI2 795 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 STOX1Q6ZVD7 989 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 DGKHQ86XP1 1220 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 SPICE1Q8N0Z3 855 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 GMCL1P1Q8NEA9 526 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
LINC00996-202ENST00000486954 MKL1Q969V6 931 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 CFHR5Q9BXR6 569 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
LINC00996-202ENST00000486954 KAT14Q9H8E8 782 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 IL17RBQ9NRM6 502 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
LINC00996-202ENST00000486954 F5H6K3 240 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 IFIT3O14879 490 aaKnown RBP13.71□□□□□ -0.21
LINC00996-202ENST00000486954 TBC1D8O95759 1140 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 HMGB1P09429 215 aaKnown RBP13.71□□□□□ -0.21
LINC00996-202ENST00000486954 PSMA5P28066 241 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 HOXA7P31268 230 aaPredicted RBP13.71□□□□□ -0.21
LINC00996-202ENST00000486954 MCM5P33992 734 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
LINC00996-202ENST00000486954 KLRC3Q07444 240 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 CRHR2Q13324 411 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 TSGA10IPQ3SY00 556 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 C8orf34Q49A92 452 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 SLFN13Q68D06 897 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 SIAH1Q8IUQ4 282 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 MB21D2Q8IYB1 491 aaPredicted RBP13.71□□□□□ -0.21
LINC00996-202ENST00000486954 NEK1Q96PY6 1258 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 MTA3Q9BTC8 594 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 USP26Q9BXU7 913 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.21
LINC00996-202ENST00000486954 TAF6LQ9Y6J9 622 aa13.71□□□□□ -0.21
LINC00996-202ENST00000486954 FOXN1O15353 648 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 PRC1O43663 620 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 TLR2O60603 784 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 FLOT1O75955 427 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 NDUFB10O96000 172 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 CYP2C8P10632 490 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 SLC1A4P43007 532 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 WTAPQ15007 396 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 TMEM67Q5HYA8 995 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 FAM83BQ5T0W9 1011 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 ENAHQ8N8S7 591 aaPredicted RBP13.7□□□□□ -0.22
LINC00996-202ENST00000486954 TMEM87BQ96K49 555 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
LINC00996-202ENST00000486954 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 ASCC2Q9H1I8 757 aaPredicted RBP13.7□□□□□ -0.22
LINC00996-202ENST00000486954 TSKSQ9UJT2 592 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 MTMR7Q9Y216 660 aa13.7□□□□□ -0.22
LINC00996-202ENST00000486954 BMP3P12645 472 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 GCLCP48506 637 aaPredicted RBP13.69□□□□□ -0.22
LINC00996-202ENST00000486954 NOVP48745 357 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 FGD1P98174 961 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 IKQ13123 557 aaPredicted RBP13.69□□□□□ -0.22
LINC00996-202ENST00000486954 BLOC1S2Q6QNY1 142 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
LINC00996-202ENST00000486954 CATSPERGQ6ZRH7 1159 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 PNMA1Q8ND90 353 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 DCAF4Q8WV16 495 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 KCNB2Q92953 911 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 GMCL1Q96IK5 515 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 SNX14Q9Y5W7 946 aa13.69□□□□□ -0.22
LINC00996-202ENST00000486954 MYPNQ86TC9 1320 aa13.68□□□□□ -0.22
LINC00996-202ENST00000486954 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
LINC00996-202ENST00000486954 HSPA8P11142 646 aaKnown RBP13.68□□□□□ -0.22
LINC00996-202ENST00000486954 HERVK_113P62684 666 aa13.68□□□□□ -0.22
LINC00996-202ENST00000486954 COG2Q14746 738 aa13.68□□□□□ -0.22
LINC00996-202ENST00000486954 NOM1Q5C9Z4 860 aaKnown RBP13.68□□□□□ -0.22
LINC00996-202ENST00000486954 RCSD1Q6JBY9 416 aa13.68□□□□□ -0.22
LINC00996-202ENST00000486954 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
LINC00996-202ENST00000486954 CHST3Q7LGC8 479 aa13.68□□□□□ -0.22
LINC00996-202ENST00000486954 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms