RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 KRT26Q7Z3Y9 468 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 KIAA1328Q86T90 577 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 NELFBQ8WX92 580 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 HPS3Q969F9 1004 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 ABHD10Q9NUJ1 306 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 N4BP2Q86UW6 1770 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 PPP1R3GB7ZBB8 358 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 IFNAR1P17181 557 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 MICALL1Q8N3F8 863 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 GPATCH11Q8N954 259 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 SRPRBQ9Y5M8 271 aaKnown RBP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 TTC26A0AVF1 554 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 PMS1P54277 932 aaKnown RBP13.97□□□□□ -0.17
HSPG2-211ENST00000486901 BICDL1Q6ZP65 573 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 SPATA5Q8NB90 893 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 HDAC7Q8WUI4 952 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 TNKSO95271 1327 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 CIAO1O76071 339 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 GGCXP38435 758 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 ARHGAP25P42331 645 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 CTR9Q6PD62 1173 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 IPO4Q8TEX9 1081 aaKnown RBP13.97□□□□□ -0.17
HSPG2-211ENST00000486901 DYNLL1P63167 89 aaKnown RBP13.97□□□□□ -0.17
HSPG2-211ENST00000486901 ADGRA1Q86SQ6 560 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 GPKOWQ92917 476 aaPredicted RBP eCLIP13.97□□□□□ -0.17
HSPG2-211ENST00000486901 LACRTQ9GZZ8 138 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 AGPAT5Q9NUQ2 364 aa13.97□□□□□ -0.17
HSPG2-211ENST00000486901 SOS2Q07890 1332 aaPredicted RBP13.96□□□□□ -0.17
HSPG2-211ENST00000486901 KCNJ18B7U540 433 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 PATL2C9JE40 543 aaKnown RBP13.96□□□□□ -0.17
HSPG2-211ENST00000486901 CCT5P48643 541 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 COPB1P53618 953 aaKnown RBP13.96□□□□□ -0.17
HSPG2-211ENST00000486901 KCNJ12Q14500 433 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 KCTD16Q68DU8 428 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
HSPG2-211ENST00000486901 PANX2Q96RD6 677 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 REXO2Q9Y3B8 237 aaKnown RBP13.96□□□□□ -0.17
HSPG2-211ENST00000486901 MRC1P22897 1456 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 RCCD1A6NED2 376 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 PDE8BO95263 885 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 DEXIO95424 95 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 CYP7A1P22680 504 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 MUM1L1Q5H9M0 696 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 RASGRP2Q7LDG7 609 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 CCDC148Q8NFR7 591 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 MTRQ99707 1265 aa13.96□□□□□ -0.17
HSPG2-211ENST00000486901 EPN1Q9Y6I3 576 aaPredicted RBP13.96□□□□□ -0.17
HSPG2-211ENST00000486901 EIF5P55010 431 aaKnown RBP13.96□□□□□ -0.18
HSPG2-211ENST00000486901 MAP3K12Q12852 859 aa13.96□□□□□ -0.18
HSPG2-211ENST00000486901 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.18
HSPG2-211ENST00000486901 FAM107BQ9H098 131 aa13.96□□□□□ -0.18
HSPG2-211ENST00000486901 XDHP47989 1333 aa13.95□□□□□ -0.18
HSPG2-211ENST00000486901 AFDNP55196 1824 aaKnown RBP13.95□□□□□ -0.18
HSPG2-211ENST00000486901 B4DLN1 442 aa13.95□□□□□ -0.18
HSPG2-211ENST00000486901 ATP8B1O43520 1251 aa13.95□□□□□ -0.18
HSPG2-211ENST00000486901 PLEKP08567 350 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-211ENST00000486901 SMIM5Q71RC9 77 aa13.95□□□□□ -0.18
HSPG2-211ENST00000486901 CNGA4Q8IV77 575 aa13.95□□□□□ -0.18
HSPG2-211ENST00000486901 CPVLQ9H3G5 476 aa13.95□□□□□ -0.18
HSPG2-211ENST00000486901 KIF13AQ9H1H9 1805 aa13.95□□□□□ -0.18
HSPG2-211ENST00000486901 PRCPP42785 496 aa13.95□□□□□ -0.18
HSPG2-211ENST00000486901 GTF2A1P52655 376 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-211ENST00000486901 PROCA1Q8NCQ7 364 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-211ENST00000486901 PDE2AO00408 941 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-211ENST00000486901 ATP1A2P50993 1020 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 NLRP5P59047 1200 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 CCDC24Q8N4L8 307 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 ACSBG1Q96GR2 724 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 CRACR2AQ9BSW2 395 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 NWD2Q9ULI1 1742 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 MYH15Q9Y2K3 1946 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 NDUFA10O95299 355 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 WASF1Q92558 559 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 ISCA1Q9BUE6 129 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 KRT2P35908 639 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 TTF1Q15361 905 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-211ENST00000486901 TTC31Q49AM3 519 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-211ENST00000486901 TTC38Q5R3I4 469 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 SGMS1Q86VZ5 419 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 FBXL16Q8N461 479 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 AFAP1L1Q8TED9 768 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 TRIM47Q96LD4 638 aa13.94□□□□□ -0.18
HSPG2-211ENST00000486901 TCRBV5S4A2TA0A5A2 114 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 ERCC5P28715 1186 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 GYG1P46976 350 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 NAP1L1P55209 391 aaKnown RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 CTSWP56202 376 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 KCNQ4P56696 695 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 CYP26C1Q6V0L0 522 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 SND1Q7KZF4 910 aaKnown RBP eCLIP13.93□□□□□ -0.188e-9■■■□□ 16.9
HSPG2-211ENST00000486901 ZBTB38Q8NAP3 1195 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 RGPD5Q99666 1765 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 PAK1Q13153 545 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 JAKMIP2Q96AA8 810 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms