RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 SLC27A2O14975 620 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 ITKQ08881 620 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 BSPRYQ5W0U4 402 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 C4orf50Q6ZRC1 276 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 PHACTR3Q96KR7 559 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 NUB1Q9Y5A7 615 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 GOLGA8CPA6NN73 597 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 I3L4J1 428 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 KRT81Q14533 505 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 PSMD6Q15008 389 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 HHATQ5VTY9 493 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 TTLL7Q6ZT98 887 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 FAM76AQ8TAV0 307 aa11.69□□□□□ -0.54
SRGAP3-207ENST00000485983 GNA14O95837 355 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 IFRD2Q12894 506 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 RPS6KA2Q15349 733 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 SUPT20HL1Q3ZLR7 823 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 SYT10Q6XYQ8 523 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 NUCKS1Q9H1E3 243 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 MAGEA1P43355 309 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 PLEKHM2Q8IWE5 1019 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 RDH13Q8NBN7 331 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 RNASE9P60153 205 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 HADHQ16836 314 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 ARHGAP44Q17R89 818 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 GKAP1Q5VSY0 366 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 ZNF772Q68DY9 489 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 SCYL2Q6P3W7 929 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 ELMSAN1Q6PJG2 1045 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 GOLGA5Q8TBA6 731 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 HAUS1Q96CS2 278 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 CCDC68Q9H2F9 335 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 PSTPIP2Q9H939 334 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 QTRT2Q9H974 415 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 MYO1AQ9UBC5 1043 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 ZAP70P43403 619 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 TUBB2AQ13885 445 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 FAM47AQ5JRC9 791 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 ARMC9Q7Z3E5 817 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 SESTD1Q86VW0 696 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 KLHDC4Q8TBB5 520 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 NAPGQ99747 312 aaPredicted RBP11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 TUBB2BQ9BVA1 445 aa11.68□□□□□ -0.54
SRGAP3-207ENST00000485983 CEP104O60308 925 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 FBXO11Q86XK2 927 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 GPATCH8Q9UKJ3 1502 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 ZNF449Q6P9G9 518 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 SECISBP2LQ93073 1101 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 TTC36A6NLP5 189 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 TMEM191BP0C7N4 346 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 TFDP1Q14186 410 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 SFMBT2Q5VUG0 894 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 RSAD2Q8WXG1 361 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 DDX17Q92841 729 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 VCX3BQ9H321 246 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 NUP153P49790 1475 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 NUP160Q12769 1436 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 ICA1Q05084 483 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 IFT20Q8IY31 132 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 BBS5Q8N3I7 341 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 VPS18Q9P253 973 aa11.67□□□□□ -0.54
SRGAP3-207ENST00000485983 RXRBP28702 533 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 PPARAQ07869 468 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 EXOC8Q8IYI6 725 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 TEKT3Q9BXF9 490 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 TRIM31Q9BZY9 425 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 TLR3O15455 904 aaKnown RBP11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 PTPREP23469 700 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 SCNN1DP51172 638 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 CTSWP56202 376 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 SEPT6Q14141 434 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 HDXQ7Z353 690 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 MYL10Q9BUA6 226 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 USP17L21D6R901 530 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 POLGP54098 1239 aaPredicted RBP11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 IGBP1P78318 339 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 KIAA1841Q6NSI8 718 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 JPH2Q9BR39 696 aaPredicted RBP11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 NCOA5Q9HCD5 579 aaKnown RBP11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 C1orf112Q9NSG2 853 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 N4BP1O75113 896 aaKnown RBP11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 KRT15P19012 456 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 PRR16Q569H4 304 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 CCDC62Q6P9F0 684 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 G2E3Q7L622 706 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 PEX26Q7Z412 305 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 CEP57Q86XR8 500 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 LGR6Q9HBX8 967 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 STAM2O75886 525 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 CYP2J2P51589 502 aa11.66□□□□□ -0.54
SRGAP3-207ENST00000485983 LRMPQ12912 555 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms