RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ESYT3A0FGR9 886 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 BICDL2A1A5D9 508 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 WDR64B1ANS9 1081 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 F6X3S4 739 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 ENC1O14682 589 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 NPHP1O15259 732 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 RXRBP28702 533 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 CRKP46108 304 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 MASP1P48740 699 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 POU5F1BQ06416 359 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 C19orf57Q0VDD7 668 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 TCEA2Q15560 299 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 CWF19L2Q2TBE0 894 aaKnown RBP5.56□□□□□ -1.52
RTN4-213ENST00000485749 NBPF9Q3BBW0 867 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 NUTM2GQ5VZR2 741 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 SCARA3Q6AZY7 606 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 DRC7Q8IY82 874 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 UBASH3BQ8TF42 649 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 FBXL18Q96ME1 805 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 POP1Q99575 1024 aaKnown RBP5.56□□□□□ -1.52
RTN4-213ENST00000485749 OSBPL1AQ9BXW6 950 aa5.56□□□□□ -1.52
RTN4-213ENST00000485749 INO80BQ9C086 356 aaPredicted RBP5.56□□□□□ -1.52
RTN4-213ENST00000485749 BHLHE41Q9C0J9 482 aaPredicted RBP5.56□□□□□ -1.52
RTN4-213ENST00000485749 SH2B1Q9NRF2 756 aaPredicted RBP5.56□□□□□ -1.52
RTN4-213ENST00000485749 ZCCHC6Q5VYS8 1495 aaKnown RBP5.56□□□□□ -1.52
RTN4-213ENST00000485749 FAM221AA4D161 298 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 FBXO24O75426 580 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 CELA3AP09093 270 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 PDGFRBP09619 1106 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 PREPP48147 710 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 NLRP12P59046 1061 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 SEZ6Q53EL9 994 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 HP1BP3Q5SSJ5 553 aaPredicted RBP5.55□□□□□ -1.52
RTN4-213ENST00000485749 CC2D1BQ5T0F9 858 aaKnown RBP5.55□□□□□ -1.52
RTN4-213ENST00000485749 PAOXQ6QHF9 649 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 KRT26Q7Z3Y9 468 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 CELF2-AS1Q8N7Q2 184 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 C19orf47Q8N9M1 422 aaKnown RBP5.55□□□□□ -1.52
RTN4-213ENST00000485749 STAG1Q8WVM7 1258 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 SLC7A3Q8WY07 619 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 FERD3LQ96RJ6 166 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 CDC5LQ99459 802 aaKnown RBP5.55□□□□□ -1.52
RTN4-213ENST00000485749 OSMRQ99650 979 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 ZKSCAN3Q9BRR0 538 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 MIR1-1HGQ9H1L0 117 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 ANAPC4Q9UJX5 808 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 ZNRF3Q9ULT6 936 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 PPT2Q9UMR5 302 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 CYP8B1Q9UNU6 501 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 MAPK8IP1Q9UQF2 711 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 PLAAQ9Y263 795 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 SH3BP1Q9Y3L3 701 aa5.55□□□□□ -1.52
RTN4-213ENST00000485749 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 PDE2AO00408 941 aaPredicted RBP5.54□□□□□ -1.52
RTN4-213ENST00000485749 DDX3YO15523 660 aaKnown RBP5.54□□□□□ -1.52
RTN4-213ENST00000485749 ADAM11O75078 769 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 HSP90AB1P08238 724 aaKnown RBP5.54□□□□□ -1.52
RTN4-213ENST00000485749 LMNB1P20700 586 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 MAP4P27816 1152 aaKnown RBP5.54□□□□□ -1.52
RTN4-213ENST00000485749 SQSTM1Q13501 440 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 UBE4AQ14139 1066 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 DHX8Q14562 1220 aaKnown RBP5.54□□□□□ -1.52
RTN4-213ENST00000485749 DDX46Q7L014 1031 aaKnown RBP5.54□□□□□ -1.52
RTN4-213ENST00000485749 VSIG10LQ86VR7 867 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 FAM169BQ8N8A8 192 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 TMEM102Q8N9M5 508 aaPredicted RBP5.54□□□□□ -1.52
RTN4-213ENST00000485749 ST13P5Q8NFI4 369 aaPredicted RBP5.54□□□□□ -1.52
RTN4-213ENST00000485749 PPM1EQ8WY54 764 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 IL17RAQ96F46 866 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 ASIC4Q96FT7 647 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 MFSD14AQ96MC6 490 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 CEP89Q96ST8 783 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 KANSL2Q9H9L4 492 aa5.54□□□□□ -1.52
RTN4-213ENST00000485749 A0A096LPE4 126 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 A0A1W2PPZ6 126 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 TM4SF5O14894 197 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 CILPO75339 1184 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 F13A1P00488 732 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 FOSL1P15407 271 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 SCP2P22307 547 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 GRIA4P48058 902 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 EVA1CP58658 441 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 PPP2R3AQ06190 1150 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 FZD5Q13467 585 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 IKBKEQ14164 716 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 HSP90AA2PQ14568 343 aaPredicted RBP5.53□□□□□ -1.52
RTN4-213ENST00000485749 BRD3Q15059 726 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 LONRF2Q1L5Z9 754 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 ZC3H12BQ5HYM0 836 aaKnown RBP5.53□□□□□ -1.52
RTN4-213ENST00000485749 CCSAPQ6IQ19 270 aaPredicted RBP5.53□□□□□ -1.52
RTN4-213ENST00000485749 CCDC81Q6ZN84 652 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 C12orf50Q8NA57 414 aaPredicted RBP5.53□□□□□ -1.52
RTN4-213ENST00000485749 AGBL5Q8NDL9 886 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 BSNDQ8WZ55 320 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 MPHOSPH6Q99547 160 aaKnown RBP5.53□□□□□ -1.52
RTN4-213ENST00000485749 ZNF576Q9H609 170 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 SOX17Q9H6I2 414 aaPredicted RBP5.53□□□□□ -1.52
RTN4-213ENST00000485749 EHMT1Q9H9B1 1298 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms