RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 DGKHQ86XP1 1220 aa23.44■■□□□ 1.34
COL6A2-208ENST00000485591 IFNL1Q8IU54 200 aa23.44■■□□□ 1.34
COL6A2-208ENST00000485591 JMYQ8N9B5 988 aa23.44■■□□□ 1.34
COL6A2-208ENST00000485591 LPAR1Q92633 364 aa23.44■■□□□ 1.34
COL6A2-208ENST00000485591 MTA3Q9BTC8 594 aa23.44■■□□□ 1.34
COL6A2-208ENST00000485591 GOPCQ9HD26 462 aa23.44■■□□□ 1.34
COL6A2-208ENST00000485591 ZCCHC17Q9NP64 241 aaKnown RBP23.44■■□□□ 1.34
COL6A2-208ENST00000485591 AGTPBP1Q9UPW5 1226 aa23.44■■□□□ 1.34
COL6A2-208ENST00000485591 BTBD19C9JJ37 291 aa23.43■■□□□ 1.34
COL6A2-208ENST00000485591 TOP1P11387 765 aaKnown RBP23.43■■□□□ 1.34
COL6A2-208ENST00000485591 GPAT2Q6NUI2 795 aa23.43■■□□□ 1.34
COL6A2-208ENST00000485591 LRRC47Q8N1G4 583 aaKnown RBP23.43■■□□□ 1.34
COL6A2-208ENST00000485591 ENAHQ8N8S7 591 aaPredicted RBP23.43■■□□□ 1.34
COL6A2-208ENST00000485591 ANKS1AQ92625 1134 aa23.43■■□□□ 1.34
COL6A2-208ENST00000485591 WDR19Q8NEZ3 1342 aa23.42■■□□□ 1.34
COL6A2-208ENST00000485591 HMGB1P09429 215 aaKnown RBP23.42■■□□□ 1.34
COL6A2-208ENST00000485591 ANAPC15P60006 121 aa23.42■■□□□ 1.34
COL6A2-208ENST00000485591 MAP2K1Q02750 393 aaPredicted RBP23.42■■□□□ 1.34
COL6A2-208ENST00000485591 COL9A3Q14050 684 aaPredicted RBP23.42■■□□□ 1.34
COL6A2-208ENST00000485591 SART3Q15020 963 aaKnown RBP23.42■■□□□ 1.34
COL6A2-208ENST00000485591 SEC23AQ15436 765 aa23.42■■□□□ 1.34
COL6A2-208ENST00000485591 OTUD7BQ6GQQ9 843 aa23.42■■□□□ 1.34
COL6A2-208ENST00000485591 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
COL6A2-208ENST00000485591 GMCL1P1Q8NEA9 526 aa23.42■■□□□ 1.34
COL6A2-208ENST00000485591 JAKMIP1Q96N16 626 aaKnown RBP23.42■■□□□ 1.34
COL6A2-208ENST00000485591 TMEM47Q9BQJ4 181 aa23.42■■□□□ 1.34
COL6A2-208ENST00000485591 SLC45A1Q9Y2W3 748 aa23.42■■□□□ 1.34
COL6A2-208ENST00000485591 PRC1O43663 620 aa23.41■■□□□ 1.34
COL6A2-208ENST00000485591 VCAM1P19320 739 aa23.41■■□□□ 1.34
COL6A2-208ENST00000485591 KIAA1755Q5JYT7 1200 aa23.41■■□□□ 1.34
COL6A2-208ENST00000485591 TREML2Q5T2D2 321 aa23.41■■□□□ 1.34
COL6A2-208ENST00000485591 CHST3Q7LGC8 479 aa23.41■■□□□ 1.34
COL6A2-208ENST00000485591 IL17RAQ96F46 866 aa23.41■■□□□ 1.34
COL6A2-208ENST00000485591 ERICH2A1L162 156 aa23.4■■□□□ 1.34
COL6A2-208ENST00000485591 F5H6K3 240 aa23.4■■□□□ 1.34
COL6A2-208ENST00000485591 IFIT3O14879 490 aaKnown RBP23.4■■□□□ 1.34
COL6A2-208ENST00000485591 ALDH1A1P00352 501 aa23.4■■□□□ 1.34
COL6A2-208ENST00000485591 PSMA5P28066 241 aa23.4■■□□□ 1.34
COL6A2-208ENST00000485591 KLRC3Q07444 240 aa23.4■■□□□ 1.34
COL6A2-208ENST00000485591 DHX32Q7L7V1 743 aaKnown RBP23.4■■□□□ 1.34
COL6A2-208ENST00000485591 TMEM87BQ96K49 555 aa23.4■■□□□ 1.34
COL6A2-208ENST00000485591 BACH2Q9BYV9 841 aa23.4■■□□□ 1.34
COL6A2-208ENST00000485591 RLFQ13129 1914 aa23.39■■□□□ 1.34
COL6A2-208ENST00000485591 PDHXO00330 501 aa23.39■■□□□ 1.33
COL6A2-208ENST00000485591 WDR46O15213 610 aaKnown RBP23.39■■□□□ 1.33
COL6A2-208ENST00000485591 NDUFB10O96000 172 aa23.39■■□□□ 1.33
COL6A2-208ENST00000485591 PABPC4Q13310 644 aaKnown RBP eCLIP23.39■■□□□ 1.33
COL6A2-208ENST00000485591 IFIT1BQ5T764 474 aaKnown RBP23.39■■□□□ 1.33
COL6A2-208ENST00000485591 BLOC1S2Q6QNY1 142 aa23.39■■□□□ 1.33
COL6A2-208ENST00000485591 SPICE1Q8N0Z3 855 aa23.39■■□□□ 1.33
COL6A2-208ENST00000485591 IGDCC4Q8TDY8 1250 aa23.39■■□□□ 1.33
COL6A2-208ENST00000485591 TM6SF1Q9BZW5 370 aa23.39■■□□□ 1.33
COL6A2-208ENST00000485591 HOXA7P31268 230 aaPredicted RBP23.38■■□□□ 1.33
COL6A2-208ENST00000485591 EXOSC10Q01780 885 aaKnown RBP23.38■■□□□ 1.33
COL6A2-208ENST00000485591 WTAPQ15007 396 aa23.38■■□□□ 1.33
COL6A2-208ENST00000485591 TMEM67Q5HYA8 995 aa23.38■■□□□ 1.33
COL6A2-208ENST00000485591 UPF2Q9HAU5 1272 aaKnown RBP23.38■■□□□ 1.33
COL6A2-208ENST00000485591 A0A0G2JMZ2 1700 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 SH2B2O14492 632 aaPredicted RBP23.37■■□□□ 1.33
COL6A2-208ENST00000485591 CASTP20810 708 aaKnown RBP23.37■■□□□ 1.33
COL6A2-208ENST00000485591 SLFN13Q68D06 897 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 GMCL1Q96IK5 515 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 RPAP3Q9H6T3 665 aaPredicted RBP23.37■■□□□ 1.33
COL6A2-208ENST00000485591 KAT14Q9H8E8 782 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 ZSWIM6Q9HCJ5 1215 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 WBP1LQ9NX94 342 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 RNF186Q9NXI6 227 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 SAGE1Q9NXZ1 904 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 PNMA3Q9UL41 463 aa23.37■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L15C9J2P7 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L13C9JLJ4 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L11C9JVI0 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L18D6R9N7 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L22D6RA61 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L17D6RBQ6 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L19D6RCP7 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L20D6RJB6 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 RAD21O60216 631 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 RPS6KB1P23443 525 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 USP17L24Q0WX57 530 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 PNMA1Q8ND90 353 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 PARK7Q99497 189 aaKnown RBP23.36■■□□□ 1.33
COL6A2-208ENST00000485591 CFHR5Q9BXR6 569 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 C22orf23Q9BZE7 217 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 LY9Q9HBG7 655 aa23.36■■□□□ 1.33
COL6A2-208ENST00000485591 CPA1P15085 419 aa23.35■■□□□ 1.33
COL6A2-208ENST00000485591 OSBPP22059 807 aa23.35■■□□□ 1.33
COL6A2-208ENST00000485591 LIFRP42702 1097 aa23.35■■□□□ 1.33
COL6A2-208ENST00000485591 RBM25P49756 843 aaKnown RBP23.35■■□□□ 1.33
COL6A2-208ENST00000485591 TAF1CQ15572 869 aaPredicted RBP23.35■■□□□ 1.33
COL6A2-208ENST00000485591 CATSPERGQ6ZRH7 1159 aa23.35■■□□□ 1.33
COL6A2-208ENST00000485591 RUFY3Q7L099 469 aa23.35■■□□□ 1.33
COL6A2-208ENST00000485591 BEGAINQ9BUH8 593 aa23.35■■□□□ 1.33
COL6A2-208ENST00000485591 ASCC2Q9H1I8 757 aaPredicted RBP23.35■■□□□ 1.33
COL6A2-208ENST00000485591 CA12O43570 354 aa23.34■■□□□ 1.33
COL6A2-208ENST00000485591 IRX3P78415 501 aaPredicted RBP23.34■■□□□ 1.33
COL6A2-208ENST00000485591 FAM83BQ5T0W9 1011 aa23.34■■□□□ 1.33
COL6A2-208ENST00000485591 TMTC2Q8N394 836 aa23.34■■□□□ 1.33
COL6A2-208ENST00000485591 DCAF4Q8WV16 495 aa23.34■■□□□ 1.33
COL6A2-208ENST00000485591 TCEANC2Q96MN5 208 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms