RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 PHKA2P46019 1235 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 MAP3K10Q02779 954 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 WDR43Q15061 677 aaKnown RBP eCLIP7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 GORABQ5T7V8 394 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 KIAA0319Q5VV43 1072 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 SV2BQ7L1I2 683 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 GOLM1Q8NBJ4 401 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 GLIS3Q8NEA6 775 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 STAG1Q8WVM7 1258 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 IRF7Q92985 503 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 ACSBG1Q96GR2 724 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 PLEKHF1Q96S99 279 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 PPM1HQ9ULR3 514 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 TLR6Q9Y2C9 796 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 FAN1Q9Y2M0 1017 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 CD2APQ9Y5K6 639 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 GPC6Q9Y625 555 aaPredicted RBP7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 SCN11AQ9UI33 1791 aa7.09□□□□□ -1.27
NHLRC3-205ENST00000485407 DOT1LQ8TEK3 1739 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 GMPRP36959 345 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 CABP4P57796 275 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 FBXW10Q5XX13 1052 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 MPRIPQ6WCQ1 1025 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 TPTE2Q6XPS3 522 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 Q6ZVU0 165 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 CELF2-AS1Q8N7Q2 184 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 PHC3Q8NDX5 983 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 PIGBQ92521 554 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 SYTL4Q96C24 671 aaPredicted RBP7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 SHDQ96IW2 340 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 PHACTR3Q96KR7 559 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 RHOVQ96L33 236 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 LATS2Q9NRM7 1088 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 TMOD3Q9NYL9 352 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 PPT2Q9UMR5 302 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 ADAMTS7Q9UKP4 1686 aa7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 VIRMAQ69YN4 1812 aaKnown RBP7.08□□□□□ -1.28
NHLRC3-205ENST00000485407 ERBB4Q15303 1308 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 PNPLA7Q6ZV29 1317 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 MAPK8IP3Q9UPT6 1336 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 PDPK1O15530 556 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 RNMTO43148 476 aaKnown RBP7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 MAN1A2O60476 641 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 GREM1O60565 184 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 PEX14O75381 377 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 PDGFRBP09619 1106 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 EDN3P14138 238 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 CTCFP49711 727 aaPredicted RBP7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 LIG3P49916 1009 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 EIF6P56537 245 aaKnown RBP7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 SEZ6Q53EL9 994 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 ARSJQ5FYB0 599 aaPredicted RBP7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 LRRC69Q6ZNQ3 347 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 PRPF38AQ8NAV1 312 aaKnown RBP7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 SMC1BQ8NDV3 1235 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 JDP2Q8WYK2 163 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 RTF1Q92541 710 aaKnown RBP7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 TSEN34Q9BSV6 310 aaKnown RBP7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 GRIP2Q9C0E4 1043 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 SLC52A2Q9HAB3 445 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 KCNQ5Q9NR82 932 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 STK17AQ9UEE5 414 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 ADAMTS8Q9UP79 889 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 KDM6AO15550 1401 aaPredicted RBP7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 LY75O60449 1722 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 QSER1Q2KHR3 1735 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 TOGARAM1Q9Y4F4 1720 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 CEMIPQ8WUJ3 1361 aa7.07□□□□□ -1.28
NHLRC3-205ENST00000485407 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 HCLS1P14317 486 aaPredicted RBP7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 LMOD3Q0VAK6 560 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 CAMK2GQ13555 558 aaPredicted RBP7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 DDR2Q16832 855 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 PRPF40BQ6NWY9 871 aaKnown RBP7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 C16orf86Q6ZW13 317 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 KIAA0907Q7Z7F0 614 aaPredicted RBP7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 FMNL3Q8IVF7 1028 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 EXOC8Q8IYI6 725 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 IL17REQ8NFR9 667 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 PNISRQ8TF01 805 aaKnown RBP7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 RUNDC1Q96C34 613 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 CCDC136Q96JN2 1154 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 ACTR10Q9NZ32 417 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 MSRB2Q9Y3D2 182 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 C10orf71Q711Q0 1435 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 ZNF831Q5JPB2 1677 aa7.06□□□□□ -1.28
NHLRC3-205ENST00000485407 CICQ96RK0 1608 aaPredicted RBP7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 MRC1P22897 1456 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 CCDC194A0A1B0GVG4 234 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 CCER2I3L3R5 266 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 GARTP22102 1010 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 MCM4P33991 863 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 CRKP46108 304 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 MASP1P48740 699 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 LMNB2Q03252 620 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 TEFQ10587 303 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 GRIN2CQ14957 1233 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 FERMT3Q86UX7 667 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms