RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
RFTN1-210ENST00000484752 INPP5BP32019 993 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
RFTN1-210ENST00000484752 AKAP17AQ02040 695 aaKnown RBP13.49□□□□□ -0.25
RFTN1-210ENST00000484752 SCRN1Q12765 414 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 TROAPQ12815 778 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 MAP3K11Q16584 847 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 TRIM22Q8IYM9 498 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
RFTN1-210ENST00000484752 C2orf69Q8N8R5 385 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 SMC1BQ8NDV3 1235 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 GMCL1P1Q8NEA9 526 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
RFTN1-210ENST00000484752 ISY1Q9ULR0 285 aaKnown RBP13.49□□□□□ -0.25
RFTN1-210ENST00000484752 LARGE1O95461 756 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 GUCY1A2P33402 732 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 SLC1A4P43007 532 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 RRP1BQ14684 758 aaKnown RBP13.48□□□□□ -0.25
RFTN1-210ENST00000484752 GRM4Q14833 912 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 CCDC96Q2M329 555 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 GPATCH4Q5T3I0 446 aaKnown RBP13.48□□□□□ -0.25
RFTN1-210ENST00000484752 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 FAM184AQ8NB25 1140 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 DCAF4Q8WV16 495 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 WASF1Q92558 559 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 SENP2Q9HC62 589 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 MTMR7Q9Y216 660 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 TMX2Q9Y320 296 aa13.48□□□□□ -0.25
RFTN1-210ENST00000484752 GREB1LQ9C091 1923 aaPredicted RBP13.47□□□□□ -0.25
RFTN1-210ENST00000484752 CELF2O95319 508 aaKnown RBP13.47□□□□□ -0.25
RFTN1-210ENST00000484752 PTPRAP18433 802 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 RXRAP19793 462 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 PDCP20941 246 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 VGLL4Q14135 290 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 SLFN13Q68D06 897 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 CLEC10AQ8IUN9 316 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 CCDC144CPQ8IYA2 1237 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
RFTN1-210ENST00000484752 LPAR1Q92633 364 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 ZKSCAN4Q969J2 545 aaPredicted RBP13.47□□□□□ -0.25
RFTN1-210ENST00000484752 WDR18Q9BV38 432 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 GBA2Q9HCG7 927 aaPredicted RBP13.47□□□□□ -0.25
RFTN1-210ENST00000484752 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
RFTN1-210ENST00000484752 DOCK1Q14185 1865 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 C19orf81C9J6K1 198 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 USP17L10C9JJH3 530 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 F5H6K3 240 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 TRAF5O00463 557 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 PDHBP11177 359 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 SLC4A3P48751 1232 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 PPATQ06203 517 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 KLRC3Q07444 240 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 SSRP1Q08945 709 aaKnown RBP13.46□□□□□ -0.25
RFTN1-210ENST00000484752 ERO1BQ86YB8 467 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 RAB11FIP4Q86YS3 637 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 SPRYD3Q8NCJ5 442 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 ZNF280CQ8ND82 737 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 GMCL1Q96IK5 515 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 KIAA1683Q9H0B3 1180 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 VCPKMTQ9H867 229 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 NCOA5Q9HCD5 579 aaKnown RBP13.46□□□□□ -0.25
RFTN1-210ENST00000484752 TMOD4Q9NZQ9 345 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 ZHX2Q9Y6X8 837 aa13.46□□□□□ -0.25
RFTN1-210ENST00000484752 PAPPA2Q9BXP8 1791 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 STK36Q9NRP7 1315 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 PTPDC1A2A3K4 754 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 SNHG28P0DPA3 235 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 IFNAR1P17181 557 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 XBP1P17861 261 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 SMARCA1P28370 1054 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 IKQ13123 557 aaPredicted RBP13.45□□□□□ -0.26
RFTN1-210ENST00000484752 USP17L2Q6R6M4 530 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.45□□□□□ -0.26
RFTN1-210ENST00000484752 TMTC3Q6ZXV5 915 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 SEC63Q9UGP8 760 aaKnown RBP13.45□□□□□ -0.26
RFTN1-210ENST00000484752 SNCAIPQ9Y6H5 919 aa13.45□□□□□ -0.26
RFTN1-210ENST00000484752 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 TOMM70O94826 608 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 NDUFB10O96000 172 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 BMP3P12645 472 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 GJB2P29033 226 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 ADD1P35611 737 aaKnown RBP13.44□□□□□ -0.26
RFTN1-210ENST00000484752 ECE1P42892 770 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 BACE1P56817 501 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 JAG1P78504 1218 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 TRIM29Q14134 588 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 SHROOM1Q2M3G4 852 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-210ENST00000484752 NSUN7Q8NE18 718 aaKnown RBP13.44□□□□□ -0.26
RFTN1-210ENST00000484752 SLC10A4Q96EP9 437 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 RNF26Q9BY78 433 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-210ENST00000484752 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 FZD1Q9UP38 647 aa13.44□□□□□ -0.26
RFTN1-210ENST00000484752 PALM3A6NDB9 673 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms