RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 USP17L12C9JPN9 530 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 USP17L21D6R901 530 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 FANCGO15287 622 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 CLCN6P51797 869 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 MAP3K9P80192 1104 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 ZNF174Q15697 407 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 TOGARAM2Q6ZUX3 1019 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 CRNKL1Q9BZJ0 848 aaKnown RBP22.36■■□□□ 1.17
LIMS2-215ENST00000484252 ATP8A2Q9NTI2 1148 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 MYH2Q9UKX2 1941 aa22.36■■□□□ 1.17
LIMS2-215ENST00000484252 NT5C2P49902 561 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 IQUBQ8NA54 791 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 ZNF384Q8TF68 577 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 NSUN4Q96CB9 384 aaKnown RBP22.35■■□□□ 1.17
LIMS2-215ENST00000484252 CARD6Q9BX69 1037 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 ADD3Q9UEY8 706 aaKnown RBP22.35■■□□□ 1.17
LIMS2-215ENST00000484252 hCG_1642624A0A1W2PR95 340 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 CCDC175P0C221 793 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 CD44P16070 742 aaKnown RBP22.35■■□□□ 1.17
LIMS2-215ENST00000484252 PBX1P40424 430 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 FAM193AP78312 1265 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 SLC10A5Q5PT55 438 aa22.35■■□□□ 1.17
LIMS2-215ENST00000484252 PPP1R3GB7ZBB8 358 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 SCG2P13521 617 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 PTGDRQ13258 359 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 ZNF771Q7L3S4 317 aaPredicted RBP22.34■■□□□ 1.17
LIMS2-215ENST00000484252 SRBD1Q8N5C6 995 aaKnown RBP22.34■■□□□ 1.17
LIMS2-215ENST00000484252 IGSF22Q8N9C0 903 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 ARPP21Q9UBL0 812 aaPredicted RBP22.34■■□□□ 1.17
LIMS2-215ENST00000484252 COL5A3P25940 1745 aaPredicted RBP22.34■■□□□ 1.17
LIMS2-215ENST00000484252 NRAPQ86VF7 1730 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 BAZ2AQ9UIF9 1905 aaKnown RBP22.34■■□□□ 1.17
LIMS2-215ENST00000484252 SBK1Q52WX2 424 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 KLHL10Q6JEL2 608 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 C3orf67Q6ZVT6 689 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 CCDC51Q96ER9 411 aa22.34■■□□□ 1.17
LIMS2-215ENST00000484252 ZNF831Q5JPB2 1677 aa22.33■■□□□ 1.17
LIMS2-215ENST00000484252 ITIH6Q6UXX5 1313 aa22.33■■□□□ 1.17
LIMS2-215ENST00000484252 NLRP5P59047 1200 aa22.33■■□□□ 1.17
LIMS2-215ENST00000484252 PFKFB3Q16875 520 aaPredicted RBP22.33■■□□□ 1.17
LIMS2-215ENST00000484252 TMCO3Q6UWJ1 677 aa22.33■■□□□ 1.17
LIMS2-215ENST00000484252 WDR24Q96S15 920 aa22.33■■□□□ 1.17
LIMS2-215ENST00000484252 MRFAP1Q9Y605 127 aa22.33■■□□□ 1.17
LIMS2-215ENST00000484252 LAMB1P07942 1786 aa22.33■■□□□ 1.17
LIMS2-215ENST00000484252 WNT7AO00755 349 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 MECOMQ03112 1051 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 E2F4Q16254 413 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 FAM177A1Q8N128 213 aaPredicted RBP22.32■■□□□ 1.16
LIMS2-215ENST00000484252 KIFC2Q96AC6 838 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 DCP1AQ9NPI6 582 aaPredicted RBP22.32■■□□□ 1.16
LIMS2-215ENST00000484252 ZBTB22O15209 634 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 TEX33O43247 280 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 ATP8B1O43520 1251 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 CALML3P27482 149 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 KIF5BP33176 963 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 CREBRFQ8IUR6 639 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 FHOD1Q9Y613 1164 aa22.32■■□□□ 1.16
LIMS2-215ENST00000484252 WTIPA6NIX2 430 aaPredicted RBP22.31■■□□□ 1.16
LIMS2-215ENST00000484252 GTPBP6O43824 516 aaPredicted RBP22.31■■□□□ 1.16
LIMS2-215ENST00000484252 STX17P56962 302 aa22.31■■□□□ 1.16
LIMS2-215ENST00000484252 ARL6IP4Q66PJ3 421 aaKnown RBP22.31■■□□□ 1.16
LIMS2-215ENST00000484252 CNGA4Q8IV77 575 aa22.31■■□□□ 1.16
LIMS2-215ENST00000484252 BBXQ8WY36 941 aaPredicted RBP22.31■■□□□ 1.16
LIMS2-215ENST00000484252 ANKRD2Q9GZV1 360 aa22.31■■□□□ 1.16
LIMS2-215ENST00000484252 RMND1Q9NWS8 449 aa22.31■■□□□ 1.16
LIMS2-215ENST00000484252 ZRANB2O95218 330 aaKnown RBP eCLIP22.3■■□□□ 1.16
LIMS2-215ENST00000484252 PPP2R3AQ06190 1150 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 SPAG1Q07617 926 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 RBL2Q08999 1139 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 TERF2Q15554 542 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 GPR161Q8N6U8 529 aaKnown RBP22.3■■□□□ 1.16
LIMS2-215ENST00000484252 CELF1Q92879 486 aaKnown RBP22.3■■□□□ 1.16
LIMS2-215ENST00000484252 XDHP47989 1333 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 MAST2Q6P0Q8 1798 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 MFAP3LO75121 409 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 ADAMTS2O95450 1211 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 PDXDC2PQ6P474 469 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 PIK3AP1Q6ZUJ8 805 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 SH3GLB2Q9NR46 395 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 LIMA1Q9UHB6 759 aaKnown RBP22.3■■□□□ 1.16
LIMS2-215ENST00000484252 RWDD2AQ9UIY3 292 aa22.3■■□□□ 1.16
LIMS2-215ENST00000484252 IGSF3O75054 1194 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 FECHP22830 423 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 GTF2E1P29083 439 aaPredicted RBP22.29■■□□□ 1.16
LIMS2-215ENST00000484252 CASP1P29466 404 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 HIBADHP31937 336 aaKnown RBP22.29■■□□□ 1.16
LIMS2-215ENST00000484252 NOM1Q5C9Z4 860 aaKnown RBP22.29■■□□□ 1.16
LIMS2-215ENST00000484252 DESI2Q9BSY9 194 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 NYXQ9GZU5 481 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 ADGRG1Q9Y653 693 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 CASZ1Q86V15 1759 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 LRRC10BA6NIK2 292 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 PNMA6AP0CW24 399 aaPredicted RBP22.29■■□□□ 1.16
LIMS2-215ENST00000484252 LONP1P36776 959 aaKnown RBP22.29■■□□□ 1.16
LIMS2-215ENST00000484252 RPS8P62241 208 aaKnown RBP22.29■■□□□ 1.16
LIMS2-215ENST00000484252 BARGINQ6ZT62 677 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 CTNND2Q9UQB3 1225 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 SPATA31A5Q5VU36 1347 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 SPATA31A7Q8IWB4 1347 aa22.29■■□□□ 1.16
LIMS2-215ENST00000484252 SOWAHDA6NJG2 315 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms