RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 SOWAHDA6NJG2 315 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 FUT4P22083 530 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 DSC3Q14574 896 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 EZH2Q15910 746 aaKnown RBP5.47□□□□□ -1.53
LRCH3-217ENST00000483442 ZC3H12AQ5D1E8 599 aaKnown RBP5.47□□□□□ -1.53
LRCH3-217ENST00000483442 ZNF648Q5T619 568 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-217ENST00000483442 RASIP1Q5U651 963 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 MAP1SQ66K74 1059 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-217ENST00000483442 SULF2Q8IWU5 870 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 C3orf58Q8NDZ4 430 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 GRIN3AQ8TCU5 1115 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 GPBAR1Q8TDU6 330 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 DMRTB1Q96MA1 342 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 HEXIM2Q96MH2 286 aaKnown RBP5.47□□□□□ -1.53
LRCH3-217ENST00000483442 SETDB2Q96T68 719 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 CACNA2D2Q9NY47 1150 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 ADGRB3O60242 1522 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 DCCP43146 1447 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 ERBINQ96RT1 1412 aa5.47□□□□□ -1.53
LRCH3-217ENST00000483442 C1orf167Q5SNV9 1468 aa5.46□□□□□ -1.53
LRCH3-217ENST00000483442 METP08581 1390 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 PAGE1O75459 146 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 ARNTP27540 789 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 NTF4P34130 210 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 ZNF252P-AS1Q0IIN9 211 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
LRCH3-217ENST00000483442 TOP6BLQ8N6T0 577 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 PPP1R1BQ9UD71 204 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-217ENST00000483442 PCOLCE2Q9UKZ9 415 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 AKAP2Q9Y2D5 859 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 CSADQ9Y600 493 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 ABCC5O15440 1437 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 ADGRL3Q9HAR2 1447 aa5.46□□□□□ -1.54
LRCH3-217ENST00000483442 ARID1BQ8NFD5 2236 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-217ENST00000483442 RALGAPBQ86X10 1494 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 ANKRD30AQ9BXX3 1397 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 BMP6P22004 513 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 VPS72Q15906 364 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 ZNF124Q15973 351 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 AOC3Q16853 763 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 PPM1JQ5JR12 505 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 STK11IPQ8N1F8 1099 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 LRRN4CLQ8ND94 238 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 RC3H2Q9HBD1 1191 aaKnown RBP5.45□□□□□ -1.54
LRCH3-217ENST00000483442 PRDM7Q9NQW5 492 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 VAV3Q9UKW4 847 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 NPHP3Q7Z494 1330 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 LRP5O75197 1615 aa5.45□□□□□ -1.54
LRCH3-217ENST00000483442 PNMA6FA0A0J9YX94 578 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 CEACAM5P06731 702 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 NME2P22392 152 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 PRKCQQ04759 706 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 PPP2R3AQ06190 1150 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 IFI16Q16666 785 aaKnown RBP5.44□□□□□ -1.54
LRCH3-217ENST00000483442 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.44□□□□□ -1.54
LRCH3-217ENST00000483442 RNF214Q8ND24 703 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 MISP3Q96FF7 219 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 NECAB3Q96P71 396 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-217ENST00000483442 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 NLRP2Q9NX02 1062 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 NHSL1Q5SYE7 1610 aa5.44□□□□□ -1.54
LRCH3-217ENST00000483442 TRPM2O94759 1503 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 LMTK2Q8IWU2 1503 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 FAM83GA6ND36 823 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 DCDC2CA8MYV0 355 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 ENC1O14682 589 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 FBXO24O75426 580 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 TRIM37O94972 964 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 ITIH2P19823 946 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 C1QTNF8P60827 252 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 ERVK-24P63145 666 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 RING1Q06587 406 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 ENOX2Q16206 610 aaKnown RBP5.43□□□□□ -1.54
LRCH3-217ENST00000483442 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 KRT28Q7Z3Y7 464 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 C12orf40Q86WS4 652 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 CCER1Q8TC90 406 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-217ENST00000483442 CAMKK2Q96RR4 588 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 OSBPL7Q9BZF2 842 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 TNKS2Q9H2K2 1166 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 SPON1Q9HCB6 807 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 CNTNAP4Q9C0A0 1308 aa5.43□□□□□ -1.54
LRCH3-217ENST00000483442 TMEM131LA2VDJ0 1609 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 MYO5BQ9ULV0 1848 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 TREHO43280 583 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 KCNQ2O43526 872 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 NBPF8Q3BBV2 869 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 TPTE2Q6XPS3 522 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 ATG4DQ86TL0 474 aaPredicted RBP5.42□□□□□ -1.54
LRCH3-217ENST00000483442 PI4K2BQ8TCG2 481 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 FAM168AQ92567 244 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 HRASLS5Q96KN8 279 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 MKNK2Q9HBH9 465 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 CBX8Q9HC52 389 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 SSU72Q9NP77 194 aaKnown RBP5.42□□□□□ -1.54
LRCH3-217ENST00000483442 DCTN4Q9UJW0 460 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 WWC3Q9ULE0 1092 aa5.42□□□□□ -1.54
LRCH3-217ENST00000483442 DAPK1P53355 1430 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 MYOM2P54296 1465 aa5.41□□□□□ -1.54
LRCH3-217ENST00000483442 XRCC5P13010 732 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms