RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PUS3Q9BZE2 481 aaKnown RBP7.35□□□□□ -1.23
CSDE1-207ENST00000483407 TMEM39BQ9GZU3 492 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 RBM19Q9Y4C8 960 aaKnown RBP7.35□□□□□ -1.23
CSDE1-207ENST00000483407 RIPOR2Q9Y4F9 1068 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 SPEF2Q9C093 1822 aa7.35□□□□□ -1.23
CSDE1-207ENST00000483407 ZNF646O15015 1829 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 SFI1A8K8P3 1242 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 M0R2N6 131 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 ERVH48-1M5A8F1 160 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 PDE8BO95263 885 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 CD2BP2O95400 341 aaKnown RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 MYCP01106 439 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 IFIT1P09914 478 aaKnown RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 NBPF7P0C2Y1 421 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 CETPP11597 493 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 OCLNQ16625 522 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 SLC4A8Q2Y0W8 1093 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 RABL6Q3YEC7 729 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 SLC9C1Q4G0N8 1177 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 DCAF15Q66K64 600 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 WRNIP1Q96S55 665 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 MRIQ9BWK5 157 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 BICC1Q9H694 974 aaKnown RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 ZCCHC17Q9NP64 241 aaKnown RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 IQSEC3Q9UPP2 1182 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
CSDE1-207ENST00000483407 V9GY48 417 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-207ENST00000483407 UTYO14607 1347 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 EN2P19622 333 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-207ENST00000483407 ZEB1P37275 1124 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-207ENST00000483407 SCTRP47872 440 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 ERVK-9P63128 1117 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 SNAPC2Q13487 334 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 PUM3Q15397 648 aaKnown RBP7.33□□□□□ -1.24
CSDE1-207ENST00000483407 LRRC24Q50LG9 513 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 FKBP1CQ5VVH2 108 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 FAM83AQ86UY5 434 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 ERO1BQ86YB8 467 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 FAM9BQ8IZU0 186 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 FAM43AQ8N2R8 423 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 KAZALD1Q96I82 304 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 ZNF333Q96JL9 665 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 ZDHHC15Q96MV8 337 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 CXXC1Q9P0U4 656 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-207ENST00000483407 PTCH2Q9Y6C5 1203 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 A0A0C4DFX4 3053 aa7.33□□□□□ -1.24
CSDE1-207ENST00000483407 PTPRCP08575 1304 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 KIF16BQ96L93 1317 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 TLR2O60603 784 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 GNRH1P01148 92 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 SLC5A1P13866 664 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 GRM5P41594 1212 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 CACNB3P54284 484 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 PRMT2P55345 433 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 RAB15P59190 212 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 PPIL2Q13356 520 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 GRIK5Q16478 980 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 HABP4Q5JVS0 413 aaKnown RBP7.32□□□□□ -1.24
CSDE1-207ENST00000483407 HHIPL2Q6UWX4 724 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 TAS1R3Q7RTX0 852 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 ANKRD44Q8N8A2 993 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 VGLL2Q8N8G2 317 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 WDR66Q8TBY9 1149 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 ZNF341Q9BYN7 854 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 SNCAIPQ9Y6H5 919 aa7.32□□□□□ -1.24
CSDE1-207ENST00000483407 BTBD19C9JJ37 291 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 EYA2O00167 538 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 SIAH2O43255 324 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 PRMT3O60678 531 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 HOXD10P28358 340 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 LACTBP83111 547 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-207ENST00000483407 PPATQ06203 517 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 APOBEC3HQ6NTF7 200 aaKnown RBP7.31□□□□□ -1.24
CSDE1-207ENST00000483407 LIAT1Q6ZQX7 453 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 KLHDC4Q8TBB5 520 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 LPIN2Q92539 896 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 ZKSCAN4Q969J2 545 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-207ENST00000483407 PRKD2Q9BZL6 878 aa7.31□□□□□ -1.24
CSDE1-207ENST00000483407 RPAP1Q9BWH6 1393 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-207ENST00000483407 CUL9Q8IWT3 2517 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 CACNA1FO60840 1977 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 SOWAHDA6NJG2 315 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 E9PSI1 815 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 FGFR2P21802 821 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 WEE1P30291 646 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 CAP1Q01518 475 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 DHX9Q08211 1270 aaKnown RBP7.3□□□□□ -1.24
CSDE1-207ENST00000483407 ARID5BQ14865 1188 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 MIGA2Q7L4E1 593 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 ANKRD23Q86SG2 305 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 SH3TC2Q8TF17 1288 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 FAM151AQ8WW52 585 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 EMID1Q96A84 441 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-207ENST00000483407 PRIMPOLQ96LW4 560 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 USP44Q9H0E7 712 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 GNL3LQ9NVN8 582 aaKnown RBP7.3□□□□□ -1.24
CSDE1-207ENST00000483407 HTTP42858 3142 aa7.3□□□□□ -1.24
CSDE1-207ENST00000483407 TMEM229AB2RXF0 380 aa7.29□□□□□ -1.24
CSDE1-207ENST00000483407 LDHBP07195 334 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms