RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 CDK15Q96Q40 435 aa6.2□□□□□ -1.42
R3HDM1-216ENST00000483065 MYD88Q99836 296 aa6.2□□□□□ -1.42
R3HDM1-216ENST00000483065 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.2□□□□□ -1.42
R3HDM1-216ENST00000483065 DZANK1Q9NVP4 752 aa6.2□□□□□ -1.42
R3HDM1-216ENST00000483065 KLHL11Q9NVR0 708 aa6.2□□□□□ -1.42
R3HDM1-216ENST00000483065 PCDHB14Q9Y5E9 798 aa6.2□□□□□ -1.42
R3HDM1-216ENST00000483065 FRMPD2Q68DX3 1309 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-216ENST00000483065 GABRDO14764 452 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 HSD3B1P14060 373 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 RPIAP49247 311 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 SCNN1BP51168 640 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 NR5A1Q13285 461 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 BBS9Q3SYG4 887 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 CCDC93Q567U6 631 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 TMEM240Q5SV17 173 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 DACT2Q5SW24 774 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 INTS3Q68E01 1043 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 MRM1Q6IN84 353 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 MZT2AQ6P582 158 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 RSRC2Q7L4I2 434 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 ANKLE2Q86XL3 938 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 TRIM22Q8IYM9 498 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 FBXO27Q8NI29 283 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 NUP88Q99567 741 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 FHDC1Q9C0D6 1143 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 CCDC8Q9H0W5 538 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 CNNM2Q9H8M5 875 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 C1orf112Q9NSG2 853 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 C9orf78Q9NZ63 289 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 CLIC5Q9NZA1 410 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 GPN3Q9UHW5 284 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 PHTF1Q9UMS5 762 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 DMTF1Q9Y222 760 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 HRH3Q9Y5N1 445 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 MRFAP1Q9Y605 127 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 KCNMB2Q9Y691 235 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 DGKBQ9Y6T7 804 aa6.19□□□□□ -1.42
R3HDM1-216ENST00000483065 MEIS3P2A8K0S8 358 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 ENC1O14682 589 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 PRPF3O43395 683 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 ORC4O43929 436 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 OPA1O60313 960 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 CFBP00751 764 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 PF4V1P10720 104 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 SLC5A1P13866 664 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 HSPA6P17066 643 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 L1CAMP32004 1257 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 IREB2P48200 963 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 RENBPP51606 427 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 SLC7A5Q01650 507 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 TRIP4Q15650 581 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 ELF2Q15723 593 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 CDC37Q16543 378 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 TBC1D10BQ4KMP7 808 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 PPP1R26Q5T8A7 1209 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 BTLAQ7Z6A9 289 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 ANKRD23Q86SG2 305 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 CCNJLQ8IV13 435 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 MPNDQ8N594 471 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 CCT6BQ92526 530 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 TIFAQ96CG3 184 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 AARSD1Q9BTE6 412 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 EMILIN2Q9BXX0 1053 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 RASSF1Q9NS23 344 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 TMEM39AQ9NV64 488 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 GTF2IRD1Q9UHL9 959 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 HDAC9Q9UKV0 1011 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 NUB1Q9Y5A7 615 aa6.18□□□□□ -1.42
R3HDM1-216ENST00000483065 A0A087WZG4 1122 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 F5H423 210 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 DDX3YO15523 660 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 NBNO60934 754 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 ADH1AP07327 375 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 ITPKAP23677 461 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 RPL6Q02878 288 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 TRIM61Q5EBN2 209 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 IQSEC1Q6DN90 963 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 MZT2BQ6NZ67 158 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 MAATS1Q7Z4T9 603 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 SRGAP1Q7Z6B7 1085 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 SRLQ86TD4 932 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 SAPCD2Q86UD0 394 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 TMEM40Q8WWA1 233 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 EXOC2Q96KP1 924 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 LGR6Q9HBX8 967 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 DDX21Q9NR30 783 aaKnown RBP eCLIP6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 LRP2BPQ9P2M1 347 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 TTLL3Q9Y4R7 772 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 IPPQ9Y573 584 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 WASHC2AQ641Q2 1341 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 ITIH6Q6UXX5 1313 aa6.17□□□□□ -1.42
R3HDM1-216ENST00000483065 ABHD14A-ACY1A0A1B0GW23 586 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 A0A1W2PRQ8 180 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 CBFA2T2O43439 604 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 CD2BP2O95400 341 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 RPN1P04843 607 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 IGFALSP35858 605 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 TXLNAP40222 546 aa6.16□□□□□ -1.42
R3HDM1-216ENST00000483065 KRT85P78386 507 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms