RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 NEK4P51957 841 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 ATP2B2Q01814 1243 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 SNAPC2Q13487 334 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 USP17L2Q6R6M4 530 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 GMCL1P1Q8NEA9 526 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 C12orf42Q96LP6 360 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 TCEANC2Q96MN5 208 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 FEZ1Q99689 392 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 LRRC2Q9BYS8 371 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 VCPKMTQ9H867 229 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 KAT14Q9H8E8 782 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 GOPCQ9HD26 462 aa24.3■■□□□ 1.48
VPS16-207ENST00000481812 A0A0G2JLL6 359 aaPredicted RBP24.29■■□□□ 1.48
VPS16-207ENST00000481812 TRIM75PA6NK02 468 aa24.29■■□□□ 1.48
VPS16-207ENST00000481812 FAM155AB1AL88 458 aaPredicted RBP24.29■■□□□ 1.48
VPS16-207ENST00000481812 GTF2A2P52657 109 aa24.29■■□□□ 1.48
VPS16-207ENST00000481812 EVCP57679 992 aa24.29■■□□□ 1.48
VPS16-207ENST00000481812 FGD1P98174 961 aa24.29■■□□□ 1.48
VPS16-207ENST00000481812 ANKRD1Q15327 319 aa24.29■■□□□ 1.48
VPS16-207ENST00000481812 PRRT2Q7Z6L0 340 aaPredicted RBP24.29■■□□□ 1.48
VPS16-207ENST00000481812 LPAR1Q92633 364 aa24.29■■□□□ 1.48
VPS16-207ENST00000481812 LOC285556D6RIA3 1793 aa24.29■■□□□ 1.48
VPS16-207ENST00000481812 MTMR2Q13614 643 aa24.28■■□□□ 1.48
VPS16-207ENST00000481812 PROCA1Q8NCQ7 364 aaPredicted RBP24.28■■□□□ 1.48
VPS16-207ENST00000481812 PNMA1Q8ND90 353 aa24.28■■□□□ 1.48
VPS16-207ENST00000481812 MS4A4AQ96JQ5 239 aa24.28■■□□□ 1.48
VPS16-207ENST00000481812 GPHNQ9NQX3 736 aaPredicted RBP24.28■■□□□ 1.48
VPS16-207ENST00000481812 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.28■■□□□ 1.48
VPS16-207ENST00000481812 CCDC69A6NI79 296 aa24.27■■□□□ 1.48
VPS16-207ENST00000481812 F5H6K3 240 aa24.27■■□□□ 1.48
VPS16-207ENST00000481812 KLRC3Q07444 240 aa24.27■■□□□ 1.48
VPS16-207ENST00000481812 TOB2Q14106 344 aaPredicted RBP24.27■■□□□ 1.48
VPS16-207ENST00000481812 FASTKD5Q7L8L6 764 aaKnown RBP24.27■■□□□ 1.48
VPS16-207ENST00000481812 MAP3K14Q99558 947 aa24.27■■□□□ 1.48
VPS16-207ENST00000481812 EMILIN3Q9NT22 766 aa24.27■■□□□ 1.48
VPS16-207ENST00000481812 TESPA1A2RU30 521 aaPredicted RBP24.26■■□□□ 1.47
VPS16-207ENST00000481812 MANSC4A6NHS7 340 aaPredicted RBP24.26■■□□□ 1.47
VPS16-207ENST00000481812 CETPP11597 493 aa24.26■■□□□ 1.47
VPS16-207ENST00000481812 RCAN1P53805 252 aa24.26■■□□□ 1.47
VPS16-207ENST00000481812 INHBEP58166 350 aa24.26■■□□□ 1.47
VPS16-207ENST00000481812 LRRC47Q8N1G4 583 aaKnown RBP24.26■■□□□ 1.47
VPS16-207ENST00000481812 BRF1Q92994 677 aa24.26■■□□□ 1.47
VPS16-207ENST00000481812 GMCL1Q96IK5 515 aa24.26■■□□□ 1.47
VPS16-207ENST00000481812 SENP2Q9HC62 589 aa24.26■■□□□ 1.47
VPS16-207ENST00000481812 TMOD4Q9NZQ9 345 aa24.26■■□□□ 1.47
VPS16-207ENST00000481812 DDAH1O94760 285 aa24.25■■□□□ 1.47
VPS16-207ENST00000481812 SNHG28P0DPA3 235 aa24.25■■□□□ 1.47
VPS16-207ENST00000481812 HMGCS2P54868 508 aa24.25■■□□□ 1.47
VPS16-207ENST00000481812 NOGQ13253 232 aa24.25■■□□□ 1.47
VPS16-207ENST00000481812 NFXL1Q6ZNB6 911 aa24.25■■□□□ 1.47
VPS16-207ENST00000481812 CATIPQ7Z7H3 387 aa24.25■■□□□ 1.47
VPS16-207ENST00000481812 ZNF654Q8IZM8 581 aa24.25■■□□□ 1.47
VPS16-207ENST00000481812 CAPNS2Q96L46 248 aa24.25■■□□□ 1.47
VPS16-207ENST00000481812 WDR46O15213 610 aaKnown RBP24.24■■□□□ 1.47
VPS16-207ENST00000481812 ST18O60284 1047 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 NDUFB10O96000 172 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 CALM1P0DP23 149 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 CALM2P0DP24 149 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 CALM3P0DP25 149 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 AK2P54819 239 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 TROAPQ12815 778 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 MOGSQ13724 837 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 SLFN13Q68D06 897 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 CYP4F22Q6NT55 531 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 APOA5Q6Q788 366 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 SYNE3Q6ZMZ3 975 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 REM2Q8IYK8 340 aaPredicted RBP24.24■■□□□ 1.47
VPS16-207ENST00000481812 DCAF4Q8WV16 495 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 SLC12A7Q9Y666 1083 aa24.24■■□□□ 1.47
VPS16-207ENST00000481812 ZYXQ15942 572 aaKnown RBP24.23■■□□□ 1.47
VPS16-207ENST00000481812 ZNF274Q96GC6 653 aaPredicted RBP24.23■■□□□ 1.47
VPS16-207ENST00000481812 PDHBP11177 359 aa24.22■■□□□ 1.47
VPS16-207ENST00000481812 APOBRQ0VD83 1088 aa24.22■■□□□ 1.47
VPS16-207ENST00000481812 PPP2R5BQ15173 497 aa24.22■■□□□ 1.47
VPS16-207ENST00000481812 KIAA1755Q5JYT7 1200 aa24.22■■□□□ 1.47
VPS16-207ENST00000481812 PAXIP1Q6ZW49 1069 aaPredicted RBP24.22■■□□□ 1.47
VPS16-207ENST00000481812 BRPF3Q9ULD4 1205 aa24.22■■□□□ 1.47
VPS16-207ENST00000481812 NID2Q14112 1375 aa24.21■■□□□ 1.47
VPS16-207ENST00000481812 CCL15-CCL14A0A0B4J2E2 113 aa24.21■■□□□ 1.47
VPS16-207ENST00000481812 KLF18A0A0U1RQI7 1052 aa24.21■■□□□ 1.47
VPS16-207ENST00000481812 VCAM1P19320 739 aa24.21■■□□□ 1.47
VPS16-207ENST00000481812 HOXA7P31268 230 aaPredicted RBP24.21■■□□□ 1.47
VPS16-207ENST00000481812 MCM2P49736 904 aa24.21■■□□□ 1.47
VPS16-207ENST00000481812 MKRN3Q13064 507 aaKnown RBP24.21■■□□□ 1.47
VPS16-207ENST00000481812 CCL15Q16663 113 aa24.21■■□□□ 1.47
VPS16-207ENST00000481812 GPATCH4Q5T3I0 446 aaKnown RBP24.21■■□□□ 1.47
VPS16-207ENST00000481812 ZCCHC17Q9NP64 241 aaKnown RBP24.21■■□□□ 1.47
VPS16-207ENST00000481812 AGTPBP1Q9UPW5 1226 aa24.21■■□□□ 1.47
VPS16-207ENST00000481812 SLC45A1Q9Y2W3 748 aa24.21■■□□□ 1.47
VPS16-207ENST00000481812 WDR33Q9C0J8 1336 aaKnown RBP24.2■■□□□ 1.46
VPS16-207ENST00000481812 ZBTB43O43298 467 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 PLA2G6O60733 806 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 BMP3P12645 472 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 MAP2K2P36507 400 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 SLC1A4P43007 532 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 TM4SF4P48230 202 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 SREBF2Q12772 1141 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 PABPC4Q13310 644 aaKnown RBP eCLIP24.2■■□□□ 1.46
VPS16-207ENST00000481812 ASPRV1Q53RT3 343 aa24.2■■□□□ 1.46
VPS16-207ENST00000481812 GADL1Q6ZQY3 521 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms