RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 CT47A1Q5JQC4 288 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-211ENST00000481804 GSG1L2A8MUP6 293 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 SLC5A1P13866 664 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 COPB1P53618 953 aaKnown RBP16.19■□□□□ 0.18
CCDC78-211ENST00000481804 PUM3Q15397 648 aaKnown RBP16.19■□□□□ 0.18
CCDC78-211ENST00000481804 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 FERMT2Q96AC1 680 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 V9GY48 417 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-211ENST00000481804 TCRBV5S4A2TA0A5A2 114 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 PPP1R3GB7ZBB8 358 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 SEMA3EO15041 775 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 PBX1P40424 430 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 DPYDQ12882 1025 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 PAK1Q13153 545 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 MAP9Q49MG5 647 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 IQUBQ8NA54 791 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 LPIN2Q92539 896 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 PLA2G12BQ9BX93 195 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 PLEKHA4Q9H4M7 779 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 MYO1AQ9UBC5 1043 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 TRIM10Q9UDY6 481 aa16.19■□□□□ 0.18
CCDC78-211ENST00000481804 KCNJ18B7U540 433 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 ANKRD65E5RJM6 399 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 IPO7O95373 1038 aaKnown RBP16.18■□□□□ 0.18
CCDC78-211ENST00000481804 TRIM28Q13263 835 aaKnown RBP16.18■□□□□ 0.18
CCDC78-211ENST00000481804 KCNJ12Q14500 433 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 KIAA1328Q86T90 577 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 MED4Q9NPJ6 270 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 LRRIQ3A6PVS8 624 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-211ENST00000481804 BMP15O95972 392 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 NELFBQ8WX92 580 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 ZNF512BQ96KM6 892 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-211ENST00000481804 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 EPN1Q9Y6I3 576 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-211ENST00000481804 TNKSO95271 1327 aa16.18■□□□□ 0.18
CCDC78-211ENST00000481804 RNF40O75150 1001 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 STARD3NLO95772 234 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 RASGRF1Q13972 1273 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 HLFQ16534 295 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 TTC38Q5R3I4 469 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 CCDC122Q5T0U0 273 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 SMARCC1Q92922 1105 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-211ENST00000481804 CHP1Q99653 195 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 CRACR2AQ9BSW2 395 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 HDAC6Q9UBN7 1215 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 ARID4AP29374 1257 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-211ENST00000481804 PTGDRQ13258 359 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 TRIM14Q14142 442 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 EARS2Q5JPH6 523 aaKnown RBP16.17■□□□□ 0.18
CCDC78-211ENST00000481804 STAG1Q8WVM7 1258 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 ESR2Q92731 530 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 RNF26Q9BY78 433 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-211ENST00000481804 ATRNO75882 1429 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 NLRP10Q86W26 655 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 AFAP1L1Q8TED9 768 aa16.17■□□□□ 0.18
CCDC78-211ENST00000481804 MKRN1Q9UHC7 482 aaKnown RBP16.17■□□□□ 0.18
CCDC78-211ENST00000481804 ITIH6Q6UXX5 1313 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 RNF225M0QZC1 329 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-211ENST00000481804 ZMYND10O75800 440 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 NDUFA10O95299 355 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 GNAT2P19087 354 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 CTR9Q6PD62 1173 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
CCDC78-211ENST00000481804 CATIPQ7Z7H3 387 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 PCMTD1Q96MG8 357 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-211ENST00000481804 ABCF2Q9UG63 623 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 IQSEC3Q9UPP2 1182 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-211ENST00000481804 LUC7L2Q9Y383 392 aaKnown RBP16.16■□□□□ 0.18
CCDC78-211ENST00000481804 MYH7P12883 1935 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 MCM7P33993 719 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 ARHGAP25P42331 645 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 TJP1Q07157 1748 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 RTL9Q8NET4 1388 aa16.16■□□□□ 0.18
CCDC78-211ENST00000481804 ADAMTSL3P82987 1691 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 MCM3P25205 808 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 PPARAQ07869 468 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 TCP11X2Q5H9J9 407 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
CCDC78-211ENST00000481804 SDR42E1Q8WUS8 393 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 SAR1BQ9Y6B6 198 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 SRGAP2O75044 1071 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 IFIT1BQ5T764 474 aaKnown RBP16.15■□□□□ 0.18
CCDC78-211ENST00000481804 LIMA1Q9UHB6 759 aaKnown RBP16.15■□□□□ 0.18
CCDC78-211ENST00000481804 KAT6BQ8WYB5 2073 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
CCDC78-211ENST00000481804 SH3RF1Q7Z6J0 888 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 VGLL2Q8N8G2 317 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 OR8K1Q8NGG5 319 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 CTCFLQ8NI51 663 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-211ENST00000481804 MAGEC2Q9UBF1 373 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-211ENST00000481804 RWDD2AQ9UIY3 292 aa16.15■□□□□ 0.18
CCDC78-211ENST00000481804 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.17
CCDC78-211ENST00000481804 CYP7A1P22680 504 aa16.14■□□□□ 0.17
CCDC78-211ENST00000481804 TTC31Q49AM3 519 aaPredicted RBP16.14■□□□□ 0.17
CCDC78-211ENST00000481804 TFR2Q9UP52 801 aa16.14■□□□□ 0.17
CCDC78-211ENST00000481804 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
CCDC78-211ENST00000481804 EIF3CLB5ME19 914 aaKnown RBP16.14■□□□□ 0.17
CCDC78-211ENST00000481804 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms