RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 SCHIP1Q9P0W5 487 aaPredicted RBP12.78□□□□□ -0.36
TRIM27-205ENST00000481474 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
TRIM27-205ENST00000481474 DPF3Q92784 378 aa12.77□□□□□ -0.36
TRIM27-205ENST00000481474 FAM149B1Q96BN6 582 aa12.77□□□□□ -0.36
TRIM27-205ENST00000481474 EXOC3O60645 756 aa12.77□□□□□ -0.36
TRIM27-205ENST00000481474 SMAD1Q15797 465 aaKnown RBP12.77□□□□□ -0.36
TRIM27-205ENST00000481474 PIK3AP1Q6ZUJ8 805 aa12.77□□□□□ -0.36
TRIM27-205ENST00000481474 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 I3L4J1 428 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 GSTA4O15217 222 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 FLOT1O75955 427 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 PLCG2P16885 1265 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 GNAQP50148 359 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 OCRLQ01968 901 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 SARS2Q9NP81 518 aaKnown RBP12.77□□□□□ -0.37
TRIM27-205ENST00000481474 TLR3O15455 904 aaKnown RBP12.77□□□□□ -0.37
TRIM27-205ENST00000481474 DIAPH2O60879 1101 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 METTL23Q86XA0 190 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 TRIM55Q9BYV6 548 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 ATG3Q9NT62 314 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 F5H423 210 aaPredicted RBP12.77□□□□□ -0.37
TRIM27-205ENST00000481474 P4HA1P13674 534 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 LIG4P49917 911 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 RAP1GDS1P52306 607 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 CTTNBP2NLQ9P2B4 639 aa12.77□□□□□ -0.37
TRIM27-205ENST00000481474 UBXN8O00124 270 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 CCNYQ8ND76 341 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 SNX19Q92543 992 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 ZNF277Q9NRM2 450 aaPredicted RBP12.76□□□□□ -0.37
TRIM27-205ENST00000481474 CACNA2D2Q9NY47 1150 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 KLHL7Q8IXQ5 586 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 UHMK1Q8TAS1 419 aaKnown RBP12.76□□□□□ -0.37
TRIM27-205ENST00000481474 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
TRIM27-205ENST00000481474 ATP2B4P23634 1241 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 HVCN1Q96D96 273 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 SCAND2PQ9GZW5 306 aaPredicted RBP12.76□□□□□ -0.37
TRIM27-205ENST00000481474 CTAGE9A4FU28 777 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 ZSCAN9O15535 394 aaPredicted RBP12.76□□□□□ -0.37
TRIM27-205ENST00000481474 TMOD1P28289 359 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 SESN3P58005 492 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 CCDC62Q6P9F0 684 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 GLYCTKQ8IVS8 523 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 SH3KBP1Q96B97 665 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 KRT12Q99456 494 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 C6orf203Q9P0P8 240 aaPredicted RBP12.76□□□□□ -0.37
TRIM27-205ENST00000481474 ABCB4P21439 1286 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 C11orf74Q86VG3 221 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 CSRNP2Q9H175 543 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 ADCY5O95622 1261 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 ZNF75DP51815 510 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
TRIM27-205ENST00000481474 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
TRIM27-205ENST00000481474 STAM2O75886 525 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 POLGP54098 1239 aaPredicted RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 ASIC2Q16515 512 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 CNGA4Q8IV77 575 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 FAM89AQ96GI7 184 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 ABCC8Q09428 1581 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 GNA11P29992 359 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 TACO1Q9BSH4 297 aaKnown RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 TSPYL2Q9H2G4 693 aaPredicted RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 TPX2Q9ULW0 747 aaKnown RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 TNIKQ9UKE5 1360 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 FAM49AQ9H0Q0 323 aaPredicted RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 USP40Q9NVE5 1235 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 CACNB2Q08289 660 aaPredicted RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 RBSNQ9H1K0 784 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 SEPT9Q9UHD8 586 aaPredicted RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 PRPF4O43172 522 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 BRD1O95696 1058 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 PYGLP06737 847 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 FAM186BQ8IYM0 893 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 TTF2Q9UNY4 1162 aaKnown RBP12.75□□□□□ -0.37
TRIM27-205ENST00000481474 EXOC7Q9UPT5 735 aa12.75□□□□□ -0.37
TRIM27-205ENST00000481474 APOEP02649 317 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 RPL13P26373 211 aaKnown RBP12.74□□□□□ -0.37
TRIM27-205ENST00000481474 TMPOP42166 694 aaKnown RBP12.74□□□□□ -0.37
TRIM27-205ENST00000481474 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 UBE3AQ05086 875 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 XKR9Q5GH70 373 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 RWDD4Q6NW29 188 aaKnown RBP12.74□□□□□ -0.37
TRIM27-205ENST00000481474 RPAP2Q8IXW5 612 aaPredicted RBP12.74□□□□□ -0.37
TRIM27-205ENST00000481474 SSFA2P28290 1259 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 ZNF165P49910 485 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 TRMT10CQ7L0Y3 403 aaKnown RBP12.74□□□□□ -0.37
TRIM27-205ENST00000481474 TTC1Q99614 292 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 CALUO43852 315 aaPredicted RBP12.74□□□□□ -0.37
TRIM27-205ENST00000481474 SKAP2O75563 359 aaPredicted RBP12.74□□□□□ -0.37
TRIM27-205ENST00000481474 MBD4O95243 580 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 TNNC2P02585 160 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 CCDC105Q8IYK2 499 aa12.74□□□□□ -0.37
TRIM27-205ENST00000481474 DDX41Q9UJV9 622 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms