RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 MTERF2Q49AM1 385 aa7.73□□□□□ -1.17
UPF3A-207ENST00000481131 AXDND1Q5T1B0 1012 aaPredicted RBP7.73□□□□□ -1.17
UPF3A-207ENST00000481131 ST13P5Q8NFI4 369 aaPredicted RBP7.73□□□□□ -1.17
UPF3A-207ENST00000481131 YIPF2Q9BWQ6 316 aa7.73□□□□□ -1.17
UPF3A-207ENST00000481131 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.73□□□□□ -1.17
UPF3A-207ENST00000481131 PRDM10Q9NQV6 1147 aa7.73□□□□□ -1.17
UPF3A-207ENST00000481131 ZMYM5Q9UJ78 669 aa7.73□□□□□ -1.17
UPF3A-207ENST00000481131 FAM95CA0A1B0GW59 222 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 CBFA2T2O43439 604 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 IFRD2Q12894 506 aaPredicted RBP7.72□□□□□ -1.17
UPF3A-207ENST00000481131 SLC10A6Q3KNW5 377 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 PRSS36Q5K4E3 855 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 NBPF12Q5TAG4 269 aaPredicted RBP7.72□□□□□ -1.17
UPF3A-207ENST00000481131 EEPD1Q7L9B9 569 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 CDH24Q86UP0 819 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 SH3TC2Q8TF17 1288 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 KREMEN1Q96MU8 473 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 PFDN2Q9UHV9 154 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 CNTNAP4Q9C0A0 1308 aa7.72□□□□□ -1.17
UPF3A-207ENST00000481131 LEFTY1O75610 366 aa7.71□□□□□ -1.18
UPF3A-207ENST00000481131 BBS9Q3SYG4 887 aa7.71□□□□□ -1.18
UPF3A-207ENST00000481131 ZNF662Q6ZS27 426 aa7.71□□□□□ -1.18
UPF3A-207ENST00000481131 BEND4Q6ZU67 534 aa7.71□□□□□ -1.18
UPF3A-207ENST00000481131 TOP6BLQ8N6T0 577 aa7.71□□□□□ -1.18
UPF3A-207ENST00000481131 JMYQ8N9B5 988 aa7.71□□□□□ -1.18
UPF3A-207ENST00000481131 HAUS7Q99871 368 aa7.71□□□□□ -1.18
UPF3A-207ENST00000481131 KCNF1Q9H3M0 494 aa7.71□□□□□ -1.18
UPF3A-207ENST00000481131 ENPP3O14638 875 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 SHOXO15266 292 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 EOMESO95936 686 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 EPHX1P07099 455 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 NFKBIBQ15653 356 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 ZMYM1Q5SVZ6 1142 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 EGFLAMQ63HQ2 1017 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 DCAF15Q66K64 600 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 ZNF513Q8N8E2 541 aaPredicted RBP7.7□□□□□ -1.18
UPF3A-207ENST00000481131 GATA6Q92908 595 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 ZNF669Q96BR6 464 aaPredicted RBP7.7□□□□□ -1.18
UPF3A-207ENST00000481131 DUSP23Q9BVJ7 150 aa7.7□□□□□ -1.18
UPF3A-207ENST00000481131 DHX15O43143 795 aaKnown RBP7.69□□□□□ -1.18
UPF3A-207ENST00000481131 ADMP35318 185 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 SSRP1Q08945 709 aaKnown RBP7.69□□□□□ -1.18
UPF3A-207ENST00000481131 SQSTM1Q13501 440 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 PAOXQ6QHF9 649 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 FAM214BQ7L5A3 538 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 SHISA5Q8N114 240 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 FAM83CQ9BQN1 747 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 KLHL25Q9H0H3 589 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 LEMD3Q9Y2U8 911 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 CCDC180Q9P1Z9 1646 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 KDM2BQ8NHM5 1336 aa7.69□□□□□ -1.18
UPF3A-207ENST00000481131 ESYT3A0FGR9 886 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 ADCY3O60266 1144 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 H2AFB1P0C5Y9 115 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 H2AFB2P0C5Z0 115 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 CANXP27824 592 aaKnown RBP7.68□□□□□ -1.18
UPF3A-207ENST00000481131 C2orf27AQ580R0 203 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 CLEC10AQ8IUN9 316 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 CCDC144CPQ8IYA2 1237 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 RNF141Q8WVD5 230 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 SMARCC1Q92922 1105 aaPredicted RBP7.68□□□□□ -1.18
UPF3A-207ENST00000481131 MKRN2Q9H000 416 aaKnown RBP7.68□□□□□ -1.18
UPF3A-207ENST00000481131 APEX2Q9UBZ4 518 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 ZNF451Q9Y4E5 1061 aa7.68□□□□□ -1.18
UPF3A-207ENST00000481131 HMX2A2RU54 273 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 ANKRD34BA5PLL1 514 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 LRRN2O75325 713 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 FAM87AP0C7U9 286 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 ETV3P41162 512 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 ZNF143P52747 638 aaPredicted RBP7.67□□□□□ -1.18
UPF3A-207ENST00000481131 THAP3Q8WTV1 239 aaPredicted RBP7.67□□□□□ -1.18
UPF3A-207ENST00000481131 FGD4Q96M96 766 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 FBXL18Q96ME1 805 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 SPATA9Q9BWV2 254 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 LGR4Q9BXB1 951 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 ASPNQ9BXN1 380 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 EPN3Q9H201 632 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 C7orf69Q9H7B7 122 aa7.67□□□□□ -1.18
UPF3A-207ENST00000481131 FAM153BP0C7A2 387 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 HSD3B2P26439 372 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 CHMP4BP1P59074 171 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 RNF4P78317 190 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 AUHQ13825 339 aaKnown RBP7.66□□□□□ -1.18
UPF3A-207ENST00000481131 NBPF9Q3BBW0 867 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 HEATR6Q6AI08 1181 aaKnown RBP7.66□□□□□ -1.18
UPF3A-207ENST00000481131 C7orf61Q8IZ16 206 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 FANCLQ9NW38 375 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 TMEM260Q9NX78 707 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 PTCH2Q9Y6C5 1203 aa7.66□□□□□ -1.18
UPF3A-207ENST00000481131 A0A1W2PQU0 124 aa7.65□□□□□ -1.18
UPF3A-207ENST00000481131 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
UPF3A-207ENST00000481131 CD247P20963 164 aa7.65□□□□□ -1.18
UPF3A-207ENST00000481131 SNW1Q13573 536 aaKnown RBP7.65□□□□□ -1.18
UPF3A-207ENST00000481131 ZAR1Q86SH2 424 aa7.65□□□□□ -1.18
UPF3A-207ENST00000481131 Q96M66 194 aa7.65□□□□□ -1.18
UPF3A-207ENST00000481131 HEXIM2Q96MH2 286 aaKnown RBP7.65□□□□□ -1.18
UPF3A-207ENST00000481131 GP6Q9HCN6 339 aa7.65□□□□□ -1.18
UPF3A-207ENST00000481131 TPX2Q9ULW0 747 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms