RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 PABPC4Q13310 644 aaKnown RBP eCLIP17.87■□□□□ 0.45
ABCF3-213ENST00000480539 CREB3L3Q68CJ9 461 aa17.87■□□□□ 0.45
ABCF3-213ENST00000480539 SMCR8Q8TEV9 937 aaPredicted RBP17.87■□□□□ 0.45
ABCF3-213ENST00000480539 ZKSCAN3Q9BRR0 538 aa17.87■□□□□ 0.45
ABCF3-213ENST00000480539 ASCC2Q9H1I8 757 aaPredicted RBP17.87■□□□□ 0.45
ABCF3-213ENST00000480539 CNNM2Q9H8M5 875 aa17.87■□□□□ 0.45
ABCF3-213ENST00000480539 GOPCQ9HD26 462 aa17.87■□□□□ 0.45
ABCF3-213ENST00000480539 PNMA3Q9UL41 463 aa17.87■□□□□ 0.45
ABCF3-213ENST00000480539 RALYLQ86SE5 291 aaKnown RBP17.86■□□□□ 0.45
ABCF3-213ENST00000480539 KRT23Q9C075 422 aa17.86■□□□□ 0.45
ABCF3-213ENST00000480539 TANGO6Q9C0B7 1094 aa17.86■□□□□ 0.45
ABCF3-213ENST00000480539 CPA4Q9UI42 421 aa17.86■□□□□ 0.45
ABCF3-213ENST00000480539 GPR25O00155 361 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 TLR2O60603 784 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 REC8O95072 547 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 OSBPP22059 807 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 TRDNQ13061 729 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 NECTIN1Q15223 517 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 RASGRP2Q7LDG7 609 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 ZNF296Q8WUU4 475 aaPredicted RBP17.85■□□□□ 0.45
ABCF3-213ENST00000480539 LPAR1Q92633 364 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 CHMP4CQ96CF2 233 aa17.85■□□□□ 0.45
ABCF3-213ENST00000480539 NUP88Q99567 741 aaPredicted RBP17.85■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L15C9J2P7 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L13C9JLJ4 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L11C9JVI0 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L18D6R9N7 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L22D6RA61 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L17D6RBQ6 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L19D6RCP7 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L20D6RJB6 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 NDUFB10O96000 172 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 HOXA7P31268 230 aaPredicted RBP17.84■□□□□ 0.45
ABCF3-213ENST00000480539 USP17L24Q0WX57 530 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 FAM83BQ5T0W9 1011 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 TCP11L1Q9NUJ3 509 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 MTMR7Q9Y216 660 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 ZSWIM8A7E2V4 1837 aa17.84■□□□□ 0.45
ABCF3-213ENST00000480539 TNKSO95271 1327 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 F5H6K3 240 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 WDR46O15213 610 aaKnown RBP17.83■□□□□ 0.44
ABCF3-213ENST00000480539 ECM2O94769 699 aaPredicted RBP17.83■□□□□ 0.44
ABCF3-213ENST00000480539 HERVK_113P62684 666 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 KLRC3Q07444 240 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 RNF20Q5VTR2 975 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 SAMD1Q6SPF0 538 aaPredicted RBP17.83■□□□□ 0.44
ABCF3-213ENST00000480539 CATSPERGQ6ZRH7 1159 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 GMCL1P1Q8NEA9 526 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 NCOA7Q8NI08 942 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 MKL1Q969V6 931 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 ZSCAN10Q96SZ4 725 aaPredicted RBP17.83■□□□□ 0.44
ABCF3-213ENST00000480539 ZSWIM5Q9P217 1185 aa17.83■□□□□ 0.44
ABCF3-213ENST00000480539 ISY1Q9ULR0 285 aaKnown RBP17.83■□□□□ 0.44
ABCF3-213ENST00000480539 A0A0G2JMZ2 1700 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 PEX10O60683 326 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 FKTNO75072 461 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 NOVP48745 357 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 NT5C2P49902 561 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 COL9A3Q14050 684 aaPredicted RBP17.82■□□□□ 0.44
ABCF3-213ENST00000480539 RCSD1Q6JBY9 416 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 C17orf99Q6UX52 265 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 CHST3Q7LGC8 479 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 MB21D2Q8IYB1 491 aaPredicted RBP17.82■□□□□ 0.44
ABCF3-213ENST00000480539 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 CD99L2Q8TCZ2 262 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 P2RX7Q99572 595 aaKnown RBP17.82■□□□□ 0.44
ABCF3-213ENST00000480539 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 UBAC1Q9BSL1 405 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 SYNPO2Q9UMS6 1093 aa17.82■□□□□ 0.44
ABCF3-213ENST00000480539 SPDYE16A6NNV3 312 aaPredicted RBP17.81■□□□□ 0.44
ABCF3-213ENST00000480539 FLOT1O75955 427 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 BCRP11274 1271 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 TOP1P11387 765 aaKnown RBP17.81■□□□□ 0.44
ABCF3-213ENST00000480539 ANTXR2P58335 489 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 SP3Q02447 781 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 NOM1Q5C9Z4 860 aaKnown RBP17.81■□□□□ 0.44
ABCF3-213ENST00000480539 SLFN13Q68D06 897 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 RASEFQ8IZ41 740 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 ENAHQ8N8S7 591 aaPredicted RBP17.81■□□□□ 0.44
ABCF3-213ENST00000480539 PAGR1Q9BTK6 254 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 PRDM10Q9NQV6 1147 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 PARP14Q460N5 1801 aa17.81■□□□□ 0.44
ABCF3-213ENST00000480539 CASP8AP2Q9UKL3 1982 aa17.8■□□□□ 0.44
ABCF3-213ENST00000480539 RLFQ13129 1914 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-213ENST00000480539 MCCP23508 829 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 HSPA4P34932 840 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 CAP1Q01518 475 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 FAM110CQ1W6H9 321 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 CCDC96Q2M329 555 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 ADCK5Q3MIX3 580 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 CCDC178Q5BJE1 867 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 ATG4CQ96DT6 458 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 ARHGAP39Q9C0H5 1083 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 TXNRD2Q9NNW7 524 aa17.79■□□□□ 0.44
ABCF3-213ENST00000480539 IFIT3O14879 490 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms