RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 ANTXR2P58335 489 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 TRDNQ13061 729 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 TTLL12Q14166 644 aaPredicted RBP11.32□□□□□ -0.6
CD46-214ENST00000480003 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
CD46-214ENST00000480003 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 ESR2Q92731 530 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 MKL1Q969V6 931 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 SLC10A4Q96EP9 437 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 CLMNQ96JQ2 1002 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 TTC14Q96N46 770 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 CABP5Q9NP86 173 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 MTMR4Q9NYA4 1195 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 SNCAIPQ9Y6H5 919 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 NAV1Q8NEY1 1877 aa11.32□□□□□ -0.6
CD46-214ENST00000480003 PLIN4Q96Q06 1357 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 TSPY2A6NKD2 308 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 USP17L5A8MUK1 530 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 HMGB1P09429 215 aaKnown RBP11.31□□□□□ -0.6
CD46-214ENST00000480003 TSPY3P0CV98 308 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 TSPY8P0CW00 308 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 PSMA5P28066 241 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 VGLL4Q14135 290 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 SEPT2Q15019 361 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 SEC23AQ15436 765 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 RRP12Q5JTH9 1297 aaKnown RBP11.31□□□□□ -0.6
CD46-214ENST00000480003 RCSD1Q6JBY9 416 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 POTEEQ6S8J3 1075 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 DHX32Q7L7V1 743 aaKnown RBP11.31□□□□□ -0.6
CD46-214ENST00000480003 FBXL16Q8N461 479 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 HHIPL1Q96JK4 782 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 WDR18Q9BV38 432 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 ALDH8A1Q9H2A2 487 aaPredicted RBP11.31□□□□□ -0.6
CD46-214ENST00000480003 KANSL2Q9H9L4 492 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 UPF2Q9HAU5 1272 aaKnown RBP11.31□□□□□ -0.6
CD46-214ENST00000480003 TOMM22Q9NS69 142 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 ZBTB21Q9ULJ3 1066 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 AFG3L2Q9Y4W6 797 aa11.31□□□□□ -0.6
CD46-214ENST00000480003 NMT2O60551 498 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 MCM5P33992 734 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 HUNKP57058 714 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 PPATQ06203 517 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 CCDC178Q5BJE1 867 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 ERO1BQ86YB8 467 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
CD46-214ENST00000480003 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
CD46-214ENST00000480003 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
CD46-214ENST00000480003 AGXT2Q9BYV1 514 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.3□□□□□ -0.6
CD46-214ENST00000480003 CSADQ9Y600 493 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
CD46-214ENST00000480003 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 MPHOSPH10O00566 681 aaKnown RBP11.29□□□□□ -0.6
CD46-214ENST00000480003 CPA1P15085 419 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 RPS6KB1P23443 525 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 GJA5P36382 358 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 PBX2P40425 430 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
CD46-214ENST00000480003 MFSD10Q14728 455 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 RAB3GAP1Q15042 981 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 RGMBQ6NW40 437 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 BLOC1S2Q6QNY1 142 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 CHST3Q7LGC8 479 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 RALYLQ86SE5 291 aaKnown RBP11.29□□□□□ -0.6
CD46-214ENST00000480003 IQCA1Q86XH1 822 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
CD46-214ENST00000480003 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 ZSCAN10Q96SZ4 725 aaPredicted RBP11.29□□□□□ -0.6
CD46-214ENST00000480003 TBC1D2Q9BYX2 928 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 ELP3Q9H9T3 547 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 KCNH4Q9UQ05 1017 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 ZHX2Q9Y6X8 837 aa11.29□□□□□ -0.6
CD46-214ENST00000480003 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 CXCL11O14625 94 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 PRC1O43663 620 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 TTLL1O95922 423 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 EEF2P13639 858 aaKnown RBP11.28□□□□□ -0.6
CD46-214ENST00000480003 CASTP20810 708 aaKnown RBP11.28□□□□□ -0.6
CD46-214ENST00000480003 LIFRP42702 1097 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 PPIL2Q13356 520 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 SH3D19Q5HYK7 790 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
CD46-214ENST00000480003 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
CD46-214ENST00000480003 IL27Q8NEV9 243 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 ACER1Q8TDN7 264 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 ZKSCAN3Q9BRR0 538 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 CLIP2Q9UDT6 1046 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms