RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 COBLO75128 1261 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 CIAO1O76071 339 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 GH2P01242 217 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 ACRP10323 421 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 MFSD5Q6N075 450 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 TBC1D9Q6ZT07 1266 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 ZNF365Q70YC5 407 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 MAPKAPK5Q8IW41 473 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 NSUN4Q96CB9 384 aaKnown RBP13.78□□□□□ -0.2
CCDC18-208ENST00000479653 DNAJC18Q9H819 358 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 FRMPD3Q5JV73 1810 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 RLFQ13129 1914 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 MYH2Q9UKX2 1941 aa13.78□□□□□ -0.2
CCDC18-208ENST00000479653 CSF2RAP15509 400 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.21
CCDC18-208ENST00000479653 MRE11P49959 708 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 USP14P54578 494 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 PDS5AQ29RF7 1337 aaKnown RBP13.77□□□□□ -0.21
CCDC18-208ENST00000479653 ANKRD33Q7Z3H0 272 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 TGFBRAP1Q8WUH2 860 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 TOX2Q96NM4 488 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 MOV10L1Q9BXT6 1211 aaKnown RBP13.77□□□□□ -0.21
CCDC18-208ENST00000479653 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.21
CCDC18-208ENST00000479653 STARD7Q9NQZ5 370 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 PALD1Q9ULE6 856 aa13.77□□□□□ -0.21
CCDC18-208ENST00000479653 SPDYE16A6NNV3 312 aaPredicted RBP13.76□□□□□ -0.21
CCDC18-208ENST00000479653 ERC2O15083 957 aa13.76□□□□□ -0.21
CCDC18-208ENST00000479653 VCAM1P19320 739 aa13.76□□□□□ -0.21
CCDC18-208ENST00000479653 RAB3GAP1Q15042 981 aa13.76□□□□□ -0.21
CCDC18-208ENST00000479653 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
CCDC18-208ENST00000479653 TMEM199Q8N511 208 aa13.76□□□□□ -0.21
CCDC18-208ENST00000479653 HERVK_113Q902F9 699 aa13.76□□□□□ -0.21
CCDC18-208ENST00000479653 RPAP3Q9H6T3 665 aaPredicted RBP13.76□□□□□ -0.21
CCDC18-208ENST00000479653 AATFQ9NY61 560 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC18-208ENST00000479653 SAP30BPQ9UHR5 308 aaKnown RBP13.76□□□□□ -0.21
CCDC18-208ENST00000479653 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
CCDC18-208ENST00000479653 MYH13Q9UKX3 1938 aa13.76□□□□□ -0.21
CCDC18-208ENST00000479653 TCF20Q9UGU0 1960 aaKnown RBP13.75□□□□□ -0.21
CCDC18-208ENST00000479653 SMIM22K7EJ46 135 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 ZBTB22O15209 634 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 BAG3O95817 575 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 ERCC3P19447 782 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 PLS1Q14651 629 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
CCDC18-208ENST00000479653 LBX2Q6XYB7 198 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 WDR63Q8IWG1 891 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 NUP133Q8WUM0 1156 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.217e-6■■■□□ 18.8
CCDC18-208ENST00000479653 XAGE2Q96GT9 111 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 MAML3Q96JK9 1138 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 C11orf16Q9NQ32 467 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 HMG20BQ9P0W2 317 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 LRP2BPQ9P2M1 347 aa13.75□□□□□ -0.21
CCDC18-208ENST00000479653 PA2G4Q9UQ80 394 aaKnown RBP13.75□□□□□ -0.21
CCDC18-208ENST00000479653 YBX2Q9Y2T7 364 aaKnown RBP13.75□□□□□ -0.21
CCDC18-208ENST00000479653 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 ACLYP53396 1101 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 MVPQ14764 893 aaKnown RBP13.74□□□□□ -0.21
CCDC18-208ENST00000479653 PPP2R2DQ66LE6 453 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 METTL16Q86W50 562 aaKnown RBP13.74□□□□□ -0.21
CCDC18-208ENST00000479653 NCAPG2Q86XI2 1143 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 SPATA5Q8NB90 893 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 ACER1Q8TDN7 264 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 VTI1AQ96AJ9 217 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 NEUROD6Q96NK8 337 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 PPP1R12CQ9BZL4 782 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 SPATC1LQ9H0A9 340 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
CCDC18-208ENST00000479653 HOXC10Q9NYD6 342 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 TBX21Q9UL17 535 aa13.74□□□□□ -0.21
CCDC18-208ENST00000479653 MYO9BQ13459 2157 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 FLT1P17948 1338 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 FGBP02675 491 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 RABGGTBP53611 331 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 COG2Q14746 738 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 GORABQ5T7V8 394 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
CCDC18-208ENST00000479653 UIMC1Q96RL1 719 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 KIAA1683Q9H0B3 1180 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 ATAD5Q96QE3 1844 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 CHD7Q9P2D1 2997 aa13.73□□□□□ -0.21
CCDC18-208ENST00000479653 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
CCDC18-208ENST00000479653 REV3LO60673 3130 aa13.72□□□□□ -0.21
CCDC18-208ENST00000479653 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
CCDC18-208ENST00000479653 TLL1O43897 1013 aa13.72□□□□□ -0.21
CCDC18-208ENST00000479653 PLCG2P16885 1265 aa13.72□□□□□ -0.21
CCDC18-208ENST00000479653 TAL1P17542 331 aaPredicted RBP13.72□□□□□ -0.21
CCDC18-208ENST00000479653 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
CCDC18-208ENST00000479653 SHCBP1Q8NEM2 672 aa13.72□□□□□ -0.21
CCDC18-208ENST00000479653 TSEN34Q9BSV6 310 aaKnown RBP13.72□□□□□ -0.21
CCDC18-208ENST00000479653 MROH8Q9H579 483 aa13.72□□□□□ -0.21
CCDC18-208ENST00000479653 COG5Q9UP83 839 aa13.72□□□□□ -0.21
CCDC18-208ENST00000479653 RFXAPO00287 272 aa13.71□□□□□ -0.21
CCDC18-208ENST00000479653 FCER1AP12319 257 aa13.71□□□□□ -0.21
CCDC18-208ENST00000479653 AKR1A1P14550 325 aa13.71□□□□□ -0.21
CCDC18-208ENST00000479653 MYOGP15173 224 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms