RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 MMP1P03956 469 aa15.11■□□□□ 0.01
PDZRN3-208ENST00000479530 PPARAQ07869 468 aa15.11■□□□□ 0.01
PDZRN3-208ENST00000479530 JAKMIP3Q5VZ66 844 aa15.11■□□□□ 0.01
PDZRN3-208ENST00000479530 CRACR2BQ8N4Y2 399 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-208ENST00000479530 PANX2Q96RD6 677 aa15.11■□□□□ 0.01
PDZRN3-208ENST00000479530 RAB21Q9UL25 225 aa15.11■□□□□ 0.01
PDZRN3-208ENST00000479530 RRP15Q9Y3B9 282 aaKnown RBP15.11■□□□□ 0.01
PDZRN3-208ENST00000479530 A0A087X0B3 334 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 CASP14P31944 242 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 KIF4BQ2VIQ3 1234 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 SLC35F6Q8N357 371 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 HNRNPLLQ8WVV9 542 aaKnown RBP15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 KIF5CO60282 957 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 USP5P45974 858 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 PLCD1P51178 756 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 MSANTD4Q8NCY6 345 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 KRT23Q9C075 422 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 CSRNP2Q9H175 543 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 JAG2Q9Y219 1238 aa15.1■□□□□ 0.01
PDZRN3-208ENST00000479530 RNF225M0QZC1 329 aaPredicted RBP15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 CDC25AP30304 524 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 AFMP43652 599 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 HDXQ7Z353 690 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 ZNF654Q8IZM8 581 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 NOA1Q8NC60 698 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 CABP5Q9NP86 173 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 PBX1P40424 430 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 SLC4A8Q2Y0W8 1093 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 VPS54Q9P1Q0 977 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 HOOK1Q9UJC3 728 aaKnown RBP15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 MYH3P11055 1940 aa15.09■□□□□ 0.01
PDZRN3-208ENST00000479530 COL1A1P02452 1464 aaPredicted RBP15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 ANKRD65E5RJM6 399 aa15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 GYPCP04921 128 aa15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 RASGRP2Q7LDG7 609 aa15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 ELOA2Q8IYF1 753 aaPredicted RBP15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 RGS22Q8NE09 1264 aa15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 SPATA20Q8TB22 786 aa15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 NACAP1Q9BZK3 213 aa15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 CNNM2Q9H8M5 875 aa15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 ADD3Q9UEY8 706 aaKnown RBP15.08■□□□□ 0.01
PDZRN3-208ENST00000479530 PNPLA7Q6ZV29 1317 aa15.08■□□□□ 0
PDZRN3-208ENST00000479530 MFAP3LO75121 409 aa15.08■□□□□ 0
PDZRN3-208ENST00000479530 PPFIBP1Q86W92 1011 aa15.08■□□□□ 0
PDZRN3-208ENST00000479530 CEP112Q8N8E3 955 aa15.08■□□□□ 0
PDZRN3-208ENST00000479530 CELF1Q92879 486 aaKnown RBP15.08■□□□□ 0
PDZRN3-208ENST00000479530 EPSTI1Q96J88 318 aa15.08■□□□□ 0
PDZRN3-208ENST00000479530 DACH1Q9UI36 760 aa15.08■□□□□ 0
PDZRN3-208ENST00000479530 TNKSO95271 1327 aa15.08■□□□□ 0
PDZRN3-208ENST00000479530 LRRIQ3A6PVS8 624 aaPredicted RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 ADAMTS3O15072 1205 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 NMT2O60551 498 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 PLEKHA8P1O95397 391 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 VEGFAP15692 232 aaPredicted RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 DPYDQ12882 1025 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 CASP8Q14790 479 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 SEC23AQ15436 765 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 RIOK1Q9BRS2 568 aaKnown RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 PLEKHA4Q9H4M7 779 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 CWC15Q9P013 229 aaKnown RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 SPATA31A1Q5TZJ5 1347 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 MAGEB6P1A0A0J9YX57 407 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 CCT6AP40227 531 aaKnown RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 ERVK-24P63145 666 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 NCAPH2Q6IBW4 605 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 ENAHQ8N8S7 591 aaPredicted RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 IQUBQ8NA54 791 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 STAMQ92783 540 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 LRP5O75197 1615 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 CTAGE9A4FU28 777 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 TNNT3P45378 269 aaPredicted RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 CUL4BQ13620 913 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 PKN1Q16512 942 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 CERS3Q8IU89 383 aa15.07■□□□□ 0
PDZRN3-208ENST00000479530 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 MYH14Q7Z406 1995 aaKnown RBP15.07■□□□□ 0
PDZRN3-208ENST00000479530 MYH8P13535 1937 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 STK36Q9NRP7 1315 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 SYNRGQ9UMZ2 1314 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 NHSL1Q5SYE7 1610 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 ERCC5P28715 1186 aaPredicted RBP15.06■□□□□ 0
PDZRN3-208ENST00000479530 PARP10Q53GL7 1025 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 LEKR1Q6ZMV7 388 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 TRIM22Q8IYM9 498 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 CCDC102AQ96A19 550 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 FAM84BQ96KN1 310 aaPredicted RBP15.06■□□□□ 0
PDZRN3-208ENST00000479530 UBAC1Q9BSL1 405 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 TFCP2L1Q9NZI6 479 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 MINPP1Q9UNW1 487 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 SRPRBQ9Y5M8 271 aaKnown RBP15.06■□□□□ 0
PDZRN3-208ENST00000479530 V9GY48 417 aaPredicted RBP15.06■□□□□ 0
PDZRN3-208ENST00000479530 ANKRD36CQ5JPF3 1778 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 CDKAL1Q5VV42 579 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 SPATA1Q5VX52 437 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 TRIML1Q8N9V2 468 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 LINC00116Q8NCU8 138 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms