RNA–Protein interactions for RNA: ENST00000479515.1

PHTF2-212, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 5

Gene PHTF2, Length 2,467 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-212ENST00000479515 TRIM55Q9BYV6 548 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 MUC3BQ9H195 1237 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 DDX19BQ9UMR2 479 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 WNK3Q9BYP7 1800 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 KIAA0232Q92628 1395 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 PKD1L3Q7Z443 1732 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 TMPOP42166 694 aaKnown RBP6.16□□□□□ -1.42
PHTF2-212ENST00000479515 CALD1Q05682 793 aaKnown RBP6.16□□□□□ -1.42
PHTF2-212ENST00000479515 FAAP100Q0VG06 881 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 NFE2L2Q16236 605 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 ZNF468Q5VIY5 522 aaPredicted RBP6.16□□□□□ -1.42
PHTF2-212ENST00000479515 FBXW10Q5XX13 1052 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 AGMOQ6ZNB7 445 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 JARID2Q92833 1246 aaPredicted RBP6.16□□□□□ -1.42
PHTF2-212ENST00000479515 PLD4Q96BZ4 506 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 TRIM47Q96LD4 638 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 NT5C1AQ9BXI3 368 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 LACRTQ9GZZ8 138 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 MIR1-1HGQ9H1L0 117 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 CBX8Q9HC52 389 aa6.16□□□□□ -1.42
PHTF2-212ENST00000479515 R3HCC1Q9Y3T6 440 aaKnown RBP6.16□□□□□ -1.42
PHTF2-212ENST00000479515 NRAPQ86VF7 1730 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 MCM4P33991 863 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 CRKP46108 304 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 LAPTM4AQ15012 233 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 SEZ6Q53EL9 994 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 SULT6B1Q6IMI4 303 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 ATF7IPQ6VMQ6 1270 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 TRIM42Q8IWZ5 723 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 SMC5Q8IY18 1101 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 SAMM50Q9Y512 469 aa6.15□□□□□ -1.42
PHTF2-212ENST00000479515 KIF16BQ96L93 1317 aa6.15□□□□□ -1.43
PHTF2-212ENST00000479515 TLR3O15455 904 aaKnown RBP6.15□□□□□ -1.43
PHTF2-212ENST00000479515 TRIM27P14373 513 aa6.15□□□□□ -1.43
PHTF2-212ENST00000479515 TFE3P19532 575 aaPredicted RBP6.15□□□□□ -1.43
PHTF2-212ENST00000479515 LMNB2Q03252 620 aa6.15□□□□□ -1.43
PHTF2-212ENST00000479515 ELMSAN1Q6PJG2 1045 aa6.15□□□□□ -1.43
PHTF2-212ENST00000479515 CCDC81Q6ZN84 652 aa6.15□□□□□ -1.43
PHTF2-212ENST00000479515 C22orf23Q9BZE7 217 aa6.15□□□□□ -1.43
PHTF2-212ENST00000479515 PIF1Q9H611 641 aa6.15□□□□□ -1.43
PHTF2-212ENST00000479515 SMC4Q9NTJ3 1288 aa6.15□□□□□ -1.43
PHTF2-212ENST00000479515 COL5A2P05997 1499 aaPredicted RBP6.15□□□□□ -1.43
PHTF2-212ENST00000479515 CCDC85CA6NKD9 419 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 HMOX1P09601 288 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 ETFBP38117 255 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 EXOSC9Q06265 439 aaKnown RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 BNC2Q6ZN30 1099 aaPredicted RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 VWA5B2Q8N398 1253 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 GMPR2Q9P2T1 348 aaKnown RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 PPT2Q9UMR5 302 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 OVOS2A0A0G2JMS6 1433 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 JCADQ9P266 1359 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 ADAMTS7Q9UKP4 1686 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 HTATSF1O43719 755 aaKnown RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 PTPRAP18433 802 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 RPS26P62854 115 aaKnown RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 COL9A2Q14055 689 aaPredicted RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 RPS26P11Q5JNZ5 115 aaPredicted RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 FAM196AQ6ZSG2 479 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 SSH1Q8WYL5 1049 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 TSR2Q969E8 191 aaKnown RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 NKD1Q969G9 470 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 SMG9Q9H0W8 520 aaKnown RBP6.14□□□□□ -1.43
PHTF2-212ENST00000479515 PRDM11Q9NQV5 511 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 CHMP5Q9NZZ3 219 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 STRIP2Q9ULQ0 834 aa6.14□□□□□ -1.43
PHTF2-212ENST00000479515 IPO8O15397 1037 aaKnown RBP6.13□□□□□ -1.43
PHTF2-212ENST00000479515 GREM1O60565 184 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 SIN3BO75182 1162 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 BPNT1O95861 308 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 MX2P20592 715 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 CDC25BP30305 580 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 SOX9P48436 509 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 RIPK4P57078 832 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 PCDH1Q08174 1060 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 ALDH1L2Q3SY69 923 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 GDF6Q6KF10 455 aaPredicted RBP6.13□□□□□ -1.43
PHTF2-212ENST00000479515 ANKS3Q6ZW76 656 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 ITPRIPQ8IWB1 547 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 ZBTB40Q9NUA8 1239 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 WDR17Q8IZU2 1322 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 FSD2A1L4K1 749 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 K7ELQ4 463 aaPredicted RBP6.13□□□□□ -1.43
PHTF2-212ENST00000479515 F13A1P00488 732 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 SNRPBP14678 240 aaKnown RBP6.13□□□□□ -1.43
PHTF2-212ENST00000479515 CWF19L2Q2TBE0 894 aaKnown RBP6.13□□□□□ -1.43
PHTF2-212ENST00000479515 AMOTQ4VCS5 1084 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 LTV1Q96GA3 475 aaPredicted RBP6.13□□□□□ -1.43
PHTF2-212ENST00000479515 FERD3LQ96RJ6 166 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 KCNQ5Q9NR82 932 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 SLC6A14Q9UN76 642 aa6.13□□□□□ -1.43
PHTF2-212ENST00000479515 SCN11AQ9UI33 1791 aa6.12□□□□□ -1.43
PHTF2-212ENST00000479515 ADH7P40394 386 aa6.12□□□□□ -1.43
PHTF2-212ENST00000479515 CABP4P57796 275 aa6.12□□□□□ -1.43
PHTF2-212ENST00000479515 PIP4K2BP78356 416 aa6.12□□□□□ -1.43
PHTF2-212ENST00000479515 SEPT6Q14141 434 aa6.12□□□□□ -1.43
PHTF2-212ENST00000479515 PERM1Q5SV97 790 aa6.12□□□□□ -1.43
PHTF2-212ENST00000479515 NBPF6Q5VWK0 638 aa6.12□□□□□ -1.43
PHTF2-212ENST00000479515 SV2AQ7L0J3 742 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms