RNA–Protein interactions for RNA: ENST00000479488.1

GSE1-209, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-209ENST00000479488 RPAP3Q9H6T3 665 aaPredicted RBP18.24■□□□□ 0.51
GSE1-209ENST00000479488 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
GSE1-209ENST00000479488 MTMR4Q9NYA4 1195 aa18.24■□□□□ 0.51
GSE1-209ENST00000479488 NYAP2Q9P242 653 aa18.24■□□□□ 0.51
GSE1-209ENST00000479488 PCNTO95613 3336 aa18.24■□□□□ 0.51
GSE1-209ENST00000479488 USP17L15C9J2P7 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 USP17L13C9JLJ4 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 USP17L11C9JVI0 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 USP17L18D6R9N7 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 USP17L22D6RA61 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 USP17L17D6RBQ6 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 USP17L19D6RCP7 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 USP17L20D6RJB6 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 USP17L24Q0WX57 530 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 KIF22Q14807 665 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 IQCA1Q86XH1 822 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 MAP4K1Q92918 833 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 LSG1Q9H089 658 aaKnown RBP18.23■□□□□ 0.51
GSE1-209ENST00000479488 MTMR7Q9Y216 660 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 TACC3Q9Y6A5 838 aa18.23■□□□□ 0.51
GSE1-209ENST00000479488 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
GSE1-209ENST00000479488 NMT2O60551 498 aa18.22■□□□□ 0.51
GSE1-209ENST00000479488 KDM4AO75164 1064 aa18.22■□□□□ 0.51
GSE1-209ENST00000479488 CYP21A2P08686 494 aa18.22■□□□□ 0.51
GSE1-209ENST00000479488 SP3Q02447 781 aa18.22■□□□□ 0.51
GSE1-209ENST00000479488 RNF20Q5VTR2 975 aa18.22■□□□□ 0.51
GSE1-209ENST00000479488 ERO1AQ96HE7 468 aa18.22■□□□□ 0.51
GSE1-209ENST00000479488 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
GSE1-209ENST00000479488 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
GSE1-209ENST00000479488 REC8O95072 547 aa18.21■□□□□ 0.51
GSE1-209ENST00000479488 FGRP09769 529 aa18.21■□□□□ 0.51
GSE1-209ENST00000479488 NT5C2P49902 561 aa18.21■□□□□ 0.51
GSE1-209ENST00000479488 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
GSE1-209ENST00000479488 SIAH1Q8IUQ4 282 aa18.21■□□□□ 0.51
GSE1-209ENST00000479488 ANKRD13CQ8N6S4 541 aa18.21■□□□□ 0.51
GSE1-209ENST00000479488 CHMP4CQ96CF2 233 aa18.21■□□□□ 0.51
GSE1-209ENST00000479488 ZKSCAN3Q9BRR0 538 aa18.21■□□□□ 0.51
GSE1-209ENST00000479488 PAGR1Q9BTK6 254 aa18.21■□□□□ 0.51
GSE1-209ENST00000479488 FLOT1O75955 427 aa18.2■□□□□ 0.5
GSE1-209ENST00000479488 HOXA7P31268 230 aaPredicted RBP18.2■□□□□ 0.5
GSE1-209ENST00000479488 GCLCP48506 637 aaPredicted RBP18.2■□□□□ 0.5
GSE1-209ENST00000479488 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
GSE1-209ENST00000479488 F5H6K3 240 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 NDUFB10O96000 172 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 HERVK_113P62684 666 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 KLRC3Q07444 240 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 IKQ13123 557 aaPredicted RBP18.19■□□□□ 0.5
GSE1-209ENST00000479488 ARHGEF6Q15052 776 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 CCDC178Q5BJE1 867 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 FAM83BQ5T0W9 1011 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 CCAR1Q8IX12 1150 aaKnown RBP18.19■□□□□ 0.5
GSE1-209ENST00000479488 NCOA7Q8NI08 942 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 GTF3C2Q8WUA4 911 aaPredicted RBP18.19■□□□□ 0.5
GSE1-209ENST00000479488 P2RX7Q99572 595 aaKnown RBP18.19■□□□□ 0.5
GSE1-209ENST00000479488 CWC22Q9HCG8 908 aaKnown RBP18.19■□□□□ 0.5
GSE1-209ENST00000479488 ADGRA2Q96PE1 1338 aa18.19■□□□□ 0.5
GSE1-209ENST00000479488 ERICH2A1L162 156 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 E7EWF7 191 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 SLC27A2O14975 620 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 CCDC96Q2M329 555 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 KIAA1755Q5JYT7 1200 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 CREB3L3Q68CJ9 461 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 SLFN13Q68D06 897 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 C17orf99Q6UX52 265 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
GSE1-209ENST00000479488 IL17RBQ9NRM6 502 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 SYNPO2Q9UMS6 1093 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
GSE1-209ENST00000479488 TOP1P11387 765 aaKnown RBP18.17■□□□□ 0.5
GSE1-209ENST00000479488 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
GSE1-209ENST00000479488 LACTBP83111 547 aaPredicted RBP18.17■□□□□ 0.5
GSE1-209ENST00000479488 SART3Q15020 963 aaKnown RBP18.17■□□□□ 0.5
GSE1-209ENST00000479488 FAM110CQ1W6H9 321 aa18.17■□□□□ 0.5
GSE1-209ENST00000479488 CTU1Q7Z7A3 348 aaKnown RBP18.17■□□□□ 0.5
GSE1-209ENST00000479488 GMCL1P1Q8NEA9 526 aa18.17■□□□□ 0.5
GSE1-209ENST00000479488 TCP11L1Q9NUJ3 509 aa18.17■□□□□ 0.5
GSE1-209ENST00000479488 TRIM17Q9Y577 477 aa18.17■□□□□ 0.5
GSE1-209ENST00000479488 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
GSE1-209ENST00000479488 TNKSO95271 1327 aa18.17■□□□□ 0.5
GSE1-209ENST00000479488 FMNL1O95466 1100 aaPredicted RBP18.16■□□□□ 0.5
GSE1-209ENST00000479488 BCRP11274 1271 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 SLC1A4P43007 532 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 COG2Q14746 738 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
GSE1-209ENST00000479488 MKL1Q969V6 931 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 ZSCAN10Q96SZ4 725 aaPredicted RBP18.16■□□□□ 0.5
GSE1-209ENST00000479488 KAT14Q9H8E8 782 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 EFCC1Q9HA90 598 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 ZSWIM5Q9P217 1185 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
GSE1-209ENST00000479488 SPDYE16A6NNV3 312 aaPredicted RBP18.15■□□□□ 0.5
GSE1-209ENST00000479488 BMP3P12645 472 aa18.15■□□□□ 0.5
GSE1-209ENST00000479488 MCCP23508 829 aa18.15■□□□□ 0.5
GSE1-209ENST00000479488 PSMC4P43686 418 aa18.15■□□□□ 0.5
GSE1-209ENST00000479488 FCGRTP55899 365 aa18.15■□□□□ 0.5
GSE1-209ENST00000479488 STOX1Q6ZVD7 989 aa18.15■□□□□ 0.5
GSE1-209ENST00000479488 TMEM47Q9BQJ4 181 aa18.15■□□□□ 0.5
GSE1-209ENST00000479488 HOXC10Q9NYD6 342 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms