RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ADAMTS4O75173 837 aa15.27■□□□□ 0.04
HDAC8-217ENST00000478743 PSRC1Q6PGN9 363 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-217ENST00000478743 USP17L2Q6R6M4 530 aa15.27■□□□□ 0.04
HDAC8-217ENST00000478743 C12orf42Q96LP6 360 aa15.27■□□□□ 0.04
HDAC8-217ENST00000478743 TOX2Q96NM4 488 aa15.27■□□□□ 0.04
HDAC8-217ENST00000478743 MOV10L1Q9BXT6 1211 aaKnown RBP15.27■□□□□ 0.04
HDAC8-217ENST00000478743 HERC5Q9UII4 1024 aaKnown RBP15.27■□□□□ 0.04
HDAC8-217ENST00000478743 MYADML2A6NDP7 307 aa15.26■□□□□ 0.03
HDAC8-217ENST00000478743 DCDC2CA8MYV0 355 aa15.26■□□□□ 0.03
HDAC8-217ENST00000478743 APBB1O00213 710 aa15.26■□□□□ 0.03
HDAC8-217ENST00000478743 VCAM1P19320 739 aa15.26■□□□□ 0.03
HDAC8-217ENST00000478743 CATSPERGQ6ZRH7 1159 aa15.26■□□□□ 0.03
HDAC8-217ENST00000478743 MAML3Q96JK9 1138 aa15.26■□□□□ 0.03
HDAC8-217ENST00000478743 STARD7Q9NQZ5 370 aa15.26■□□□□ 0.03
HDAC8-217ENST00000478743 ZNF521Q96K83 1311 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 PARP14Q460N5 1801 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 CYP2C18P33260 490 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 ACLYP53396 1101 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 OTOP2Q7RTS6 562 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 SPRED2Q7Z698 418 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 SH3RF3Q8TEJ3 882 aaPredicted RBP15.25■□□□□ 0.03
HDAC8-217ENST00000478743 COG5Q9UP83 839 aa15.25■□□□□ 0.03
HDAC8-217ENST00000478743 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 SEMA3EO15041 775 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 RARBP10826 455 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 PI16Q6UXB8 463 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 LBX2Q6XYB7 198 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 RNF180Q86T96 592 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 TEX11Q8IYF3 940 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 HLA-CQ95604 372 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 VWCEQ96DN2 955 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 SIL1Q9H173 461 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 IL23AQ9NPF7 189 aa15.24■□□□□ 0.03
HDAC8-217ENST00000478743 COL11A1P12107 1806 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-217ENST00000478743 SYNRGQ9UMZ2 1314 aa15.23■□□□□ 0.03
HDAC8-217ENST00000478743 ERCC3P19447 782 aa15.23■□□□□ 0.03
HDAC8-217ENST00000478743 POU3F3P20264 500 aaPredicted RBP15.23■□□□□ 0.03
HDAC8-217ENST00000478743 ACER1Q8TDN7 264 aa15.23■□□□□ 0.03
HDAC8-217ENST00000478743 GNL3LQ9NVN8 582 aaKnown RBP15.23■□□□□ 0.03
HDAC8-217ENST00000478743 PTPRSQ13332 1948 aa15.23■□□□□ 0.03
HDAC8-217ENST00000478743 GH2P01242 217 aa15.22■□□□□ 0.03
HDAC8-217ENST00000478743 CA3P07451 260 aa15.22■□□□□ 0.03
HDAC8-217ENST00000478743 CDK7P50613 346 aa15.22■□□□□ 0.03
HDAC8-217ENST00000478743 EXOSC9Q06265 439 aaKnown RBP15.22■□□□□ 0.03
HDAC8-217ENST00000478743 CCSAPQ6IQ19 270 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-217ENST00000478743 TBC1D9Q6ZT07 1266 aa15.22■□□□□ 0.03
HDAC8-217ENST00000478743 TMEM199Q8N511 208 aa15.22■□□□□ 0.03
HDAC8-217ENST00000478743 ZGPATQ8N5A5 531 aaKnown RBP15.22■□□□□ 0.03
HDAC8-217ENST00000478743 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
HDAC8-217ENST00000478743 FEZ1Q99689 392 aa15.22■□□□□ 0.03
HDAC8-217ENST00000478743 RPAP3Q9H6T3 665 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-217ENST00000478743 PI4KBQ9UBF8 816 aa15.22■□□□□ 0.03
HDAC8-217ENST00000478743 SCN5AQ14524 2016 aa15.21■□□□□ 0.03
HDAC8-217ENST00000478743 MYO5AQ9Y4I1 1855 aaKnown RBP15.21■□□□□ 0.03
HDAC8-217ENST00000478743 ZNF865P0CJ78 1059 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-217ENST00000478743 CCDC174Q6PII3 467 aa15.21■□□□□ 0.03
HDAC8-217ENST00000478743 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
HDAC8-217ENST00000478743 MAPKAPK5Q8IW41 473 aa15.21■□□□□ 0.03
HDAC8-217ENST00000478743 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
HDAC8-217ENST00000478743 SLF2Q8IX21 1173 aa15.21■□□□□ 0.03
HDAC8-217ENST00000478743 FAM126BQ8IXS8 530 aa15.21■□□□□ 0.03
HDAC8-217ENST00000478743 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.03
HDAC8-217ENST00000478743 NSUN4Q96CB9 384 aaKnown RBP15.21■□□□□ 0.03
HDAC8-217ENST00000478743 FLT1P17948 1338 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 MYH1P12882 1939 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 FGBP02675 491 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 KCNA10Q16322 511 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 ERICH6Q7L0X2 663 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 GJD3Q8N144 294 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 SPATC1LQ9H0A9 340 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 PALD1Q9ULE6 856 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
HDAC8-217ENST00000478743 PDS5AQ29RF7 1337 aaKnown RBP15.19■□□□□ 0.02
HDAC8-217ENST00000478743 ADCY6O43306 1168 aa15.19■□□□□ 0.02
HDAC8-217ENST00000478743 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-217ENST00000478743 LPXNO60711 386 aa15.19■□□□□ 0.02
HDAC8-217ENST00000478743 PGK2P07205 417 aa15.19■□□□□ 0.02
HDAC8-217ENST00000478743 IL9P15248 144 aa15.19■□□□□ 0.02
HDAC8-217ENST00000478743 PRSS33Q8NF86 280 aa15.19■□□□□ 0.02
HDAC8-217ENST00000478743 SAP30BPQ9UHR5 308 aaKnown RBP15.19■□□□□ 0.02
HDAC8-217ENST00000478743 ZDBF2Q9HCK1 2354 aa15.19■□□□□ 0.02
HDAC8-217ENST00000478743 CCL23P55773 120 aa15.18■□□□□ 0.02
HDAC8-217ENST00000478743 GRB10Q13322 594 aa15.18■□□□□ 0.02
HDAC8-217ENST00000478743 CSPP1Q1MSJ5 1256 aa15.18■□□□□ 0.02
HDAC8-217ENST00000478743 HFE2Q6ZVN8 426 aa15.18■□□□□ 0.02
HDAC8-217ENST00000478743 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-217ENST00000478743 ARNTL2Q8WYA1 636 aa15.18■□□□□ 0.02
HDAC8-217ENST00000478743 TSEN34Q9BSV6 310 aaKnown RBP15.18■□□□□ 0.02
HDAC8-217ENST00000478743 WNT8AQ9H1J5 351 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms