RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 FOXN1O15353 648 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 CTCFP49711 727 aaPredicted RBP13.4□□□□□ -0.26
SRRT-211ENST00000478693 CRHR2Q13324 411 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 MOGSQ13724 837 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 NECTIN1Q15223 517 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 CCDC178Q5BJE1 867 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 GPAT2Q6NUI2 795 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 LPAR1Q92633 364 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 C12orf42Q96LP6 360 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 RPAP3Q9H6T3 665 aaPredicted RBP13.4□□□□□ -0.26
SRRT-211ENST00000478693 EMILIN3Q9NT22 766 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 TAF6LQ9Y6J9 622 aa13.4□□□□□ -0.26
SRRT-211ENST00000478693 TNKSO95271 1327 aa13.39□□□□□ -0.27
SRRT-211ENST00000478693 GREB1LQ9C091 1923 aaPredicted RBP13.39□□□□□ -0.27
SRRT-211ENST00000478693 CYP2C8P10632 490 aa13.39□□□□□ -0.27
SRRT-211ENST00000478693 SART3Q15020 963 aaKnown RBP13.39□□□□□ -0.27
SRRT-211ENST00000478693 STOX1Q6ZVD7 989 aa13.39□□□□□ -0.27
SRRT-211ENST00000478693 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
SRRT-211ENST00000478693 KAT14Q9H8E8 782 aa13.39□□□□□ -0.27
SRRT-211ENST00000478693 TCP11L1Q9NUJ3 509 aa13.39□□□□□ -0.27
SRRT-211ENST00000478693 SLC45A1Q9Y2W3 748 aa13.39□□□□□ -0.27
SRRT-211ENST00000478693 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 WDR46O15213 610 aaKnown RBP13.38□□□□□ -0.27
SRRT-211ENST00000478693 HSPA8P11142 646 aaKnown RBP13.38□□□□□ -0.27
SRRT-211ENST00000478693 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 IKQ13123 557 aaPredicted RBP13.38□□□□□ -0.27
SRRT-211ENST00000478693 KRT32Q14532 448 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 CCDC96Q2M329 555 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 ZSCAN10Q96SZ4 725 aaPredicted RBP13.38□□□□□ -0.27
SRRT-211ENST00000478693 ASCC2Q9H1I8 757 aaPredicted RBP13.38□□□□□ -0.27
SRRT-211ENST00000478693 IL17RBQ9NRM6 502 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 ZSWIM5Q9P217 1185 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
SRRT-211ENST00000478693 F5H6K3 240 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 IFIT3O14879 490 aaKnown RBP13.37□□□□□ -0.27
SRRT-211ENST00000478693 EPB41L2O43491 1005 aaKnown RBP13.37□□□□□ -0.27
SRRT-211ENST00000478693 NDUFB10O96000 172 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
SRRT-211ENST00000478693 HSPA4P34932 840 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 LBX1P52954 281 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 KLRC3Q07444 240 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 IFIT1BQ5T764 474 aaKnown RBP13.37□□□□□ -0.27
SRRT-211ENST00000478693 SLFN13Q68D06 897 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 CYB5R4Q7L1T6 521 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 CHST3Q7LGC8 479 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 GMCL1P1Q8NEA9 526 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 CPA4Q9UI42 421 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 PTPRFP10586 1907 aa13.37□□□□□ -0.27
SRRT-211ENST00000478693 GPR25O00155 361 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 PRC1O43663 620 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 TLR2O60603 784 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 FLOT1O75955 427 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 HOXA7P31268 230 aaPredicted RBP13.36□□□□□ -0.27
SRRT-211ENST00000478693 MCM5P33992 734 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 SLC1A4P43007 532 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 WTAPQ15007 396 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 TMEM67Q5HYA8 995 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 CATSPERGQ6ZRH7 1159 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 DGKHQ86XP1 1220 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 MB21D2Q8IYB1 491 aaPredicted RBP13.36□□□□□ -0.27
SRRT-211ENST00000478693 NKX2-3Q8TAU0 364 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 JAKMIP1Q96N16 626 aaKnown RBP13.36□□□□□ -0.27
SRRT-211ENST00000478693 TTC14Q96N46 770 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
SRRT-211ENST00000478693 TMEM47Q9BQJ4 181 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 CFHR5Q9BXR6 569 aa13.36□□□□□ -0.27
SRRT-211ENST00000478693 CTDP1Q9Y5B0 961 aaPredicted RBP13.36□□□□□ -0.27
SRRT-211ENST00000478693 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
SRRT-211ENST00000478693 BMP3P12645 472 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 HERVK_113P62684 666 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 FGD1P98174 961 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 KIF22Q14807 665 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 C8orf34Q49A92 452 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 NFXL1Q6ZNB6 911 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 ANKRD13CQ8N6S4 541 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 ENAHQ8N8S7 591 aaPredicted RBP13.35□□□□□ -0.27
SRRT-211ENST00000478693 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 GTF3C2Q8WUA4 911 aaPredicted RBP13.35□□□□□ -0.27
SRRT-211ENST00000478693 MKL1Q969V6 931 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 USP26Q9BXU7 913 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 R3HDMLQ9H3Y0 253 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 SNX14Q9Y5W7 946 aa13.35□□□□□ -0.27
SRRT-211ENST00000478693 FKTNO75072 461 aa13.34□□□□□ -0.27
SRRT-211ENST00000478693 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
SRRT-211ENST00000478693 PSMA5P28066 241 aa13.34□□□□□ -0.27
SRRT-211ENST00000478693 GCLCP48506 637 aaPredicted RBP13.34□□□□□ -0.27
SRRT-211ENST00000478693 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms