RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 BAHD1Q8TBE0 780 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-212ENST00000478573 RNF32Q9H0A6 362 aa6.81□□□□□ -1.32
CDC42BPA-212ENST00000478573 PCDHA11Q9Y5I1 949 aa6.81□□□□□ -1.32
CDC42BPA-212ENST00000478573 RBM47A0AV96 593 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 FAM221AA4D161 298 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 MINDY4BA8MYZ0 360 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 TMEM201Q5SNT2 666 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 CILP2Q8IUL8 1156 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 RNF141Q8WVD5 230 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 KREMEN1Q96MU8 473 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 TMEM74Q96NL1 305 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
CDC42BPA-212ENST00000478573 HTR3BO95264 441 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 KRT1P04264 644 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 SRFP11831 508 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 TAGLNQ01995 201 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 LCE4AQ5TA78 99 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 ATG14Q6ZNE5 492 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 FBXO33Q7Z6M2 555 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 SLFN12Q8IYM2 578 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 GOLM1Q8NBJ4 401 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 PDZD8Q8NEN9 1154 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 RHOVQ96L33 236 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 CCDC74BQ96LY2 380 aa6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 POLR3KQ9Y2Y1 108 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-212ENST00000478573 TCAF2A6NFQ2 919 aa6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 TLR3O15455 904 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 ZGLP1P0C6A0 271 aa6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 ZSCAN22P10073 491 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 PWP1Q13610 501 aa6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 C1QL4Q86Z23 238 aa6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 OXR1Q8N573 874 aa6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 FBXO27Q8NI29 283 aa6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 DHX38Q92620 1227 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 KIF2CQ99661 725 aa6.78□□□□□ -1.32
CDC42BPA-212ENST00000478573 SHISA3A0PJX4 238 aa6.77□□□□□ -1.33
CDC42BPA-212ENST00000478573 GBP1P32455 592 aa6.77□□□□□ -1.33
CDC42BPA-212ENST00000478573 KCNA10Q16322 511 aa6.77□□□□□ -1.33
CDC42BPA-212ENST00000478573 TIGD5Q53EQ6 642 aa6.77□□□□□ -1.33
CDC42BPA-212ENST00000478573 LCNL1Q6ZST4 164 aa6.77□□□□□ -1.33
CDC42BPA-212ENST00000478573 KCNN1Q92952 543 aa6.77□□□□□ -1.33
CDC42BPA-212ENST00000478573 RSRP1Q9BUV0 290 aa6.77□□□□□ -1.33
CDC42BPA-212ENST00000478573 ASPNQ9BXN1 380 aa6.77□□□□□ -1.33
CDC42BPA-212ENST00000478573 FITM1A5D6W6 292 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 ETV2O00321 342 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 DNAJA2O60884 412 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 RBM25P49756 843 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 MPP2Q14168 576 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 REC114Q7Z4M0 266 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 ZNF605Q86T29 641 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 LILRA2Q8N149 483 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 ZNF428Q96B54 188 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 SLC26A8Q96RN1 970 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 ASCC2Q9H1I8 757 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 GPR160Q9UJ42 338 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 PRR36Q9H6K5 1346 aa6.76□□□□□ -1.33
CDC42BPA-212ENST00000478573 PDE6BP35913 854 aa6.75□□□□□ -1.33
CDC42BPA-212ENST00000478573 MLECQ14165 292 aa6.75□□□□□ -1.33
CDC42BPA-212ENST00000478573 CIAPIN1Q6FI81 312 aa6.75□□□□□ -1.33
CDC42BPA-212ENST00000478573 SLC6A17Q9H1V8 727 aa6.75□□□□□ -1.33
CDC42BPA-212ENST00000478573 KBTBD4Q9NVX7 518 aa6.75□□□□□ -1.33
CDC42BPA-212ENST00000478573 ITGAEP38570 1179 aa6.74□□□□□ -1.33
CDC42BPA-212ENST00000478573 GALK1P51570 392 aa6.74□□□□□ -1.33
CDC42BPA-212ENST00000478573 DUSP4Q13115 394 aa6.74□□□□□ -1.33
CDC42BPA-212ENST00000478573 TMEM132EQ6IEE7 984 aa6.74□□□□□ -1.33
CDC42BPA-212ENST00000478573 BCL2L13Q9BXK5 485 aa6.74□□□□□ -1.33
CDC42BPA-212ENST00000478573 SP110Q9HB58 689 aa6.74□□□□□ -1.33
CDC42BPA-212ENST00000478573 CD320Q9NPF0 282 aa6.74□□□□□ -1.33
CDC42BPA-212ENST00000478573 E9PSI1 815 aa6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 NUAK1O60285 661 aa6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 RAG1P15918 1043 aa6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 ZNF16P17020 682 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 RPL10P27635 214 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 CHRNEQ04844 493 aa6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 CWF19L2Q2TBE0 894 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 ARSHQ5FYA8 562 aa6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 SPPL2CQ8IUH8 684 aa6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 INTS4Q96HW7 963 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 COPRSQ9NQ92 184 aa6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 SMG5Q9UPR3 1016 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-212ENST00000478573 MED14OSP0DP75 135 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 GLDCP23378 1020 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 LINC00310P59036 64 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 TEKQ02763 1124 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 NMIQ13287 307 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 FAM196AQ6ZSG2 479 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 IRF2BP1Q8IU81 584 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 SIAH1Q8IUQ4 282 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 SIRT2Q8IXJ6 389 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 CWC22Q9HCG8 908 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 EBF1Q9UH73 591 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 ZMYM5Q9UJ78 669 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 PCDHB14Q9Y5E9 798 aa6.72□□□□□ -1.33
CDC42BPA-212ENST00000478573 SSU72P8A0A1W2PR75 194 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 UNCXA6NJT0 531 aa6.71□□□□□ -1.34
CDC42BPA-212ENST00000478573 RGS13O14921 159 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms