RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 FMR1NBQ8N0W7 255 aaPredicted RBP14.08□□□□□ -0.16
PRPF39-203ENST00000477626 DDX49Q9Y6V7 483 aaKnown RBP14.08□□□□□ -0.16
PRPF39-203ENST00000477626 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
PRPF39-203ENST00000477626 F8W031 263 aaPredicted RBP14.08□□□□□ -0.16
PRPF39-203ENST00000477626 STXBP3O00186 592 aa14.08□□□□□ -0.16
PRPF39-203ENST00000477626 LRSAM1Q6UWE0 723 aa14.08□□□□□ -0.16
PRPF39-203ENST00000477626 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.16
PRPF39-203ENST00000477626 CCDC196A0A1B0GTZ2 297 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 PPP1R11O60927 126 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-203ENST00000477626 SLC39A14Q15043 492 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 NOSTRINQ8IVI9 506 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 CDAN1Q8IWY9 1227 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 PCDHA7Q9UN72 937 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 PPP6R2O75170 966 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 SLC4A8Q2Y0W8 1093 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 CAVIN1Q6NZI2 390 aaKnown RBP14.07□□□□□ -0.16
PRPF39-203ENST00000477626 GUCY1B3Q02153 619 aa14.07□□□□□ -0.16
PRPF39-203ENST00000477626 ZNF70Q9UC06 446 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-203ENST00000477626 TSPY2A6NKD2 308 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 FIBPO43427 364 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 POLD1P28340 1107 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 CLK2P49760 499 aaKnown RBP14.06□□□□□ -0.16
PRPF39-203ENST00000477626 CACNB3P54284 484 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 TFIP11Q9UBB9 837 aaKnown RBP14.06□□□□□ -0.16
PRPF39-203ENST00000477626 NR1I2O75469 434 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 TOP1P11387 765 aaKnown RBP14.06□□□□□ -0.16
PRPF39-203ENST00000477626 FGD1P98174 961 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 FAM83AQ86UY5 434 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 FAM184AQ8NB25 1140 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 FAM205CA6NFA0 338 aa14.06□□□□□ -0.16
PRPF39-203ENST00000477626 FBXO2Q9UK22 296 aaPredicted RBP14.06□□□□□ -0.16
PRPF39-203ENST00000477626 BTBD18B2RXH4 712 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 GOLGA6L22H0YM25 854 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 KIAA1755Q5JYT7 1200 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 ADALQ6DHV7 355 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 NFXL1Q6ZNB6 911 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 GMCL1P1Q8NEA9 526 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 RBSNQ9H1K0 784 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 TDRD3Q9H7E2 651 aaKnown RBP14.05□□□□□ -0.16
PRPF39-203ENST00000477626 KCNJ14Q9UNX9 436 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 ZBTB12Q9Y330 459 aaPredicted RBP14.05□□□□□ -0.16
PRPF39-203ENST00000477626 KIF3AQ9Y496 699 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 ZNF541Q9H0D2 1346 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 NR5A1Q13285 461 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 WWC2Q6AWC2 1192 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 SHC4Q6S5L8 630 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 CLEC10AQ8IUN9 316 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
PRPF39-203ENST00000477626 PI4KBQ9UBF8 816 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
PRPF39-203ENST00000477626 ERICH2A1L162 156 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 WNT10BO00744 389 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 SCG2P13521 617 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 IL17AQ16552 155 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 CCDC183Q5T5S1 534 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 ANO1Q5XXA6 986 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 TAOK3Q9H2K8 898 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 BARHL2Q9NY43 387 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 NYAP2Q9P242 653 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 CFAP45Q9UL16 551 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 POLR3DP05423 398 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-203ENST00000477626 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-203ENST00000477626 FOXD4L6Q3SYB3 417 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-203ENST00000477626 FOXD4L3Q6VB84 417 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-203ENST00000477626 ELOA2Q8IYF1 753 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-203ENST00000477626 CRYGNQ8WXF5 182 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 WASF1Q92558 559 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 USP17L5A8MUK1 530 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 RASSF7Q02833 373 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 FAM151AQ8WW52 585 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 ZMYND12Q9H0C1 365 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 CLSTN2Q9H4D0 955 aa14.04□□□□□ -0.16
PRPF39-203ENST00000477626 RAD17O75943 681 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 RESP18Q5W5W9 173 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 NOL10Q9BSC4 688 aaKnown RBP14.03□□□□□ -0.16
PRPF39-203ENST00000477626 V9GY48 417 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-203ENST00000477626 RPS12P25398 132 aaKnown RBP14.03□□□□□ -0.16
PRPF39-203ENST00000477626 ZNF543Q08ER8 600 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 PICALMQ13492 652 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 FOXP4Q8IVH2 680 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-203ENST00000477626 DIS3L2Q8IYB7 885 aaKnown RBP14.03□□□□□ -0.16
PRPF39-203ENST00000477626 DPF2Q92785 391 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 LZTS2Q9BRK4 669 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 ZNF287Q9HBT7 754 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 VPS54Q9P1Q0 977 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 ESYT2A0FGR8 921 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 TTLL1O95922 423 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 BTNL9Q6UXG8 535 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 PDLIM2Q96JY6 352 aa14.03□□□□□ -0.16
PRPF39-203ENST00000477626 A0A1W2PRG0 241 aa14.02□□□□□ -0.16
PRPF39-203ENST00000477626 H3BQV1 296 aa14.02□□□□□ -0.16
PRPF39-203ENST00000477626 CPLX1O14810 134 aa14.02□□□□□ -0.16
PRPF39-203ENST00000477626 IFFO2Q5TF58 517 aa14.02□□□□□ -0.16
PRPF39-203ENST00000477626 GRIN1Q05586 938 aa14.02□□□□□ -0.17
PRPF39-203ENST00000477626 KAT14Q9H8E8 782 aa14.02□□□□□ -0.17
PRPF39-203ENST00000477626 MKNK2Q9HBH9 465 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms