RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 NPC1L1Q9UHC9 1359 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 C1QTNF9BB2RNN3 333 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 FYB1O15117 783 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 MAOBP27338 520 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 POU4F3Q15319 338 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 MEX3CQ5U5Q3 659 aaKnown RBP7.17□□□□□ -1.26
VPS45-207ENST00000477558 KIAA1211Q6ZU35 1233 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 CD163Q86VB7 1156 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 ARHGEF25Q86VW2 580 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 KRTAP1-3Q8IUG1 177 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 AGGF1Q8N302 714 aaeCLIP7.17□□□□□ -1.26
VPS45-207ENST00000477558 ANKRD24Q8TF21 1146 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 CRELD1Q96HD1 420 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 ZC3H12CQ9C0D7 883 aaKnown RBP7.17□□□□□ -1.26
VPS45-207ENST00000477558 USP21Q9UK80 565 aa7.17□□□□□ -1.26
VPS45-207ENST00000477558 MAP2P11137 1827 aaKnown RBP7.16□□□□□ -1.26
VPS45-207ENST00000477558 BRWD3Q6RI45 1802 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 KIF24Q5T7B8 1368 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 LOC100289279A0A1B0GTE1 492 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 C9orf172C9J069 976 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 BMP6P22004 513 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 PPP2R3AQ06190 1150 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 CCDC85BQ15834 202 aaPredicted RBP7.16□□□□□ -1.26
VPS45-207ENST00000477558 VPS72Q15906 364 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 TSNAXIP1Q2TAA8 658 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 RASIP1Q5U651 963 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 NUTM2GQ5VZR2 741 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 ACAD11Q709F0 780 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 UNC5CLQ8IV45 518 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 TMEM87AQ8NBN3 555 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 KCNH5Q8NCM2 988 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 DDX54Q8TDD1 881 aaKnown RBP7.16□□□□□ -1.26
VPS45-207ENST00000477558 CEP44Q9C0F1 390 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 MRPL18Q9H0U6 180 aaKnown RBP7.16□□□□□ -1.26
VPS45-207ENST00000477558 TRPC5Q9UL62 973 aaPredicted RBP7.16□□□□□ -1.26
VPS45-207ENST00000477558 BLMP54132 1417 aaPredicted RBP7.16□□□□□ -1.26
VPS45-207ENST00000477558 NCAPD2Q15021 1401 aa7.16□□□□□ -1.26
VPS45-207ENST00000477558 LRRC37A3O60309 1634 aa7.15□□□□□ -1.26
VPS45-207ENST00000477558 DISP2A7MBM2 1401 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 F8W735 103 aaPredicted RBP7.15□□□□□ -1.27
VPS45-207ENST00000477558 MAP3K11Q16584 847 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 MPRIPQ6WCQ1 1025 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 SV2BQ7L1I2 683 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.15□□□□□ -1.27
VPS45-207ENST00000477558 GRIN3AQ8TCU5 1115 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 PRDM11Q9NQV5 511 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 CGNL1Q0VF96 1302 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 SPATA31A5Q5VU36 1347 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 SPATA31A7Q8IWB4 1347 aa7.15□□□□□ -1.27
VPS45-207ENST00000477558 CRB1P82279 1406 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 RGPD2P0DJD1 1756 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 RECKO95980 971 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 CYP11A1P05108 521 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 NME2P22392 152 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 ARNTP27540 789 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 ZEB1P37275 1124 aaPredicted RBP7.14□□□□□ -1.27
VPS45-207ENST00000477558 IREB2P48200 963 aaKnown RBP7.14□□□□□ -1.27
VPS45-207ENST00000477558 ST13P50502 369 aaKnown RBP7.14□□□□□ -1.27
VPS45-207ENST00000477558 RBM6P78332 1123 aaKnown RBP7.14□□□□□ -1.27
VPS45-207ENST00000477558 ADGRE1Q14246 886 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.14□□□□□ -1.27
VPS45-207ENST00000477558 PDZD3Q86UT5 571 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 SULF2Q8IWU5 870 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 TMEM130Q8N3G9 435 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 WFDC12Q8WWY7 111 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 NACC1Q96RE7 527 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 CORO1BQ9BR76 489 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 BCL11AQ9H165 835 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 RGPD1P0DJD0 1748 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 SHANK3Q9BYB0 1731 aa7.14□□□□□ -1.27
VPS45-207ENST00000477558 F6X3S4 739 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 VAMP1P23763 118 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 NOS3P29474 1203 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 ZC3H6P61129 1189 aaKnown RBP7.13□□□□□ -1.27
VPS45-207ENST00000477558 AP3B2Q13367 1082 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 MBTPS1Q14703 1052 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 CHRNA2Q15822 529 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 WDR89Q96FK6 387 aaPredicted RBP7.13□□□□□ -1.27
VPS45-207ENST00000477558 RUSC1Q9BVN2 902 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 CCDC86Q9H6F5 360 aaKnown RBP7.13□□□□□ -1.27
VPS45-207ENST00000477558 AKTIPQ9H8T0 292 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 PANK3Q9H999 370 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 CBX8Q9HC52 389 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 BTG4Q9NY30 223 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 MAP3K19Q56UN5 1328 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 SPATA31A1Q5TZJ5 1347 aa7.13□□□□□ -1.27
VPS45-207ENST00000477558 GSTP1P09211 210 aaKnown RBP7.12□□□□□ -1.27
VPS45-207ENST00000477558 NRG1Q02297 640 aaPredicted RBP7.12□□□□□ -1.27
VPS45-207ENST00000477558 PCNX4Q63HM2 1172 aa7.12□□□□□ -1.27
VPS45-207ENST00000477558 COG3Q96JB2 828 aa7.12□□□□□ -1.27
VPS45-207ENST00000477558 WDR17Q8IZU2 1322 aa7.12□□□□□ -1.27
VPS45-207ENST00000477558 FLT4P35916 1363 aa7.12□□□□□ -1.27
VPS45-207ENST00000477558 ZNF862O60290 1169 aa7.11□□□□□ -1.27
VPS45-207ENST00000477558 LIG1P18858 919 aa7.11□□□□□ -1.27
VPS45-207ENST00000477558 RXRBP28702 533 aa7.11□□□□□ -1.27
VPS45-207ENST00000477558 ZNF252P-AS1Q0IIN9 211 aa7.11□□□□□ -1.27
VPS45-207ENST00000477558 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
VPS45-207ENST00000477558 TTBK2Q6IQ55 1244 aa7.11□□□□□ -1.27
VPS45-207ENST00000477558 KCNB2Q92953 911 aa7.11□□□□□ -1.27
VPS45-207ENST00000477558 NOC4LQ9BVI4 516 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms