RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 CRIM1Q9NZV1 1036 aa5.77□□□□□ -1.49
PTCD3-212ENST00000477520 AMOTL2Q9Y2J4 779 aa5.77□□□□□ -1.49
PTCD3-212ENST00000477520 KIF3AQ9Y496 699 aa5.77□□□□□ -1.49
PTCD3-212ENST00000477520 EFCAB6Q5THR3 1501 aa5.77□□□□□ -1.49
PTCD3-212ENST00000477520 CAMSAP1Q5T5Y3 1602 aa5.77□□□□□ -1.49
PTCD3-212ENST00000477520 MADDQ8WXG6 1647 aa5.77□□□□□ -1.49
PTCD3-212ENST00000477520 PZPP20742 1482 aa5.77□□□□□ -1.49
PTCD3-212ENST00000477520 KIF7Q2M1P5 1343 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 RIMS1Q86UR5 1692 aaKnown RBP5.76□□□□□ -1.49
PTCD3-212ENST00000477520 NPATQ14207 1427 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 LEFTY1O75610 366 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 HSP90B1P14625 803 aaKnown RBP5.76□□□□□ -1.49
PTCD3-212ENST00000477520 NASPP49321 788 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-212ENST00000477520 MMP14P50281 582 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 AOC3Q16853 763 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 BHLHE22Q8NFJ8 381 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-212ENST00000477520 MYRIPQ8NFW9 859 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 ZNF622Q969S3 477 aaKnown RBP eCLIP5.76□□□□□ -1.499e-19■■□□□ 11.8
PTCD3-212ENST00000477520 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 PANK2Q9BZ23 570 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 SLKQ9H2G2 1235 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-212ENST00000477520 CHMP4BQ9H444 224 aaKnown RBP5.76□□□□□ -1.49
PTCD3-212ENST00000477520 ZFYVE28Q9HCC9 887 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 PRDM7Q9NQW5 492 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 SLC52A1Q9NWF4 448 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 CALCOCO1Q9P1Z2 691 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 PLAGL2Q9UPG8 496 aa5.76□□□□□ -1.49
PTCD3-212ENST00000477520 R3HCC1Q9Y3T6 440 aaKnown RBP5.76□□□□□ -1.49
PTCD3-212ENST00000477520 CGNL1Q0VF96 1302 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 A0A1W2PP55 124 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-212ENST00000477520 TMPRSS2O15393 492 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 SYCP1Q15431 976 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 MLANAQ16655 118 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 HP1BP3Q5SSJ5 553 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-212ENST00000477520 LILRA6Q6PI73 481 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 FLAD1Q8NFF5 587 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 CRBNQ96SW2 442 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 CORO1BQ9BR76 489 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 ZKSCAN5Q9Y2L8 839 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 PTPRMP28827 1452 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 E9PCH4 1651 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 C3P01024 1663 aa5.75□□□□□ -1.49
PTCD3-212ENST00000477520 NCANO14594 1321 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 PRRG2O14669 202 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 B3GALT4O96024 378 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 PTMAP06454 111 aaKnown RBP5.74□□□□□ -1.49
PTCD3-212ENST00000477520 RAP1GAPP47736 663 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 CEBPAP49715 358 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-212ENST00000477520 OXCT1P55809 520 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 ZNF445P59923 1031 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 IFI16Q16666 785 aaKnown RBP5.74□□□□□ -1.49
PTCD3-212ENST00000477520 ZSWIM9Q86XI8 627 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 SNX21Q969T3 373 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 WDR89Q96FK6 387 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-212ENST00000477520 PDLIM2Q96JY6 352 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 LIN7BQ9HAP6 207 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 DIAPH3Q9NSV4 1193 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 ZHX1Q9UKY1 873 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-212ENST00000477520 TNRQ92752 1358 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 ERVK-7P63135 1459 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 SPHKAPQ2M3C7 1700 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 PTPRTO14522 1441 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 NOS1P29475 1434 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 USP19O94966 1318 aa5.74□□□□□ -1.49
PTCD3-212ENST00000477520 PREX1Q8TCU6 1659 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 NLRP1Q9C000 1473 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 ANKRD30BQ9BXX2 1392 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 PDE3AQ14432 1141 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 KLHL40Q2TBA0 621 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 SLC23A3Q6PIS1 610 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 HSCBQ8IWL3 235 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 PMFBP1Q8TBY8 1022 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 GTF3C2Q8WUA4 911 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-212ENST00000477520 LIN37Q96GY3 246 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-212ENST00000477520 HRASLS5Q96KN8 279 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 TIGD1Q96MW7 591 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 TOX2Q96NM4 488 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 ZFYVE1Q9HBF4 777 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 GEMIN8Q9NWZ8 242 aaKnown RBP5.73□□□□□ -1.49
PTCD3-212ENST00000477520 OGFRQ9NZT2 677 aa5.73□□□□□ -1.49
PTCD3-212ENST00000477520 BLMP54132 1417 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-212ENST00000477520 SPATA31D1Q6ZQQ2 1576 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 FZD6O60353 706 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 TSPAN15O95858 294 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 CEACAM5P06731 702 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 TPM3P06753 285 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 LIG1P18858 919 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 ANGEL2Q5VTE6 544 aaKnown RBP5.72□□□□□ -1.49
PTCD3-212ENST00000477520 SMC5Q8IY18 1101 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 LRRC56Q8IYG6 542 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-212ENST00000477520 THEMISQ8N1K5 641 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-212ENST00000477520 RGS22Q8NE09 1264 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 FANCD2OSQ96PS1 177 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 ZNF576Q9H609 170 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 TRPM2O94759 1503 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 UHRF1BP1Q6BDS2 1440 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 NCOA3Q9Y6Q9 1424 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 SYNGAP1Q96PV0 1343 aa5.72□□□□□ -1.49
PTCD3-212ENST00000477520 KIF1BO60333 1816 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms