RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 USP17L20D6RJB6 530 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 DNM1LO00429 736 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 SHMT1P34896 483 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 PLCD1P51178 756 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L24Q0WX57 530 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 TNNI3KQ59H18 835 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 MFSD14CQ5VZR4 134 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 FERMT2Q96AC1 680 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 ASB2Q96Q27 587 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 LBHD1Q9BQE6 289 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-204ENST00000477429 RPAP3Q9H6T3 665 aaPredicted RBP11.99□□□□□ -0.49
COL4A5-204ENST00000477429 FPGT-TNNI3KV9GXZ4 949 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 SMIM22K7EJ46 135 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 BAG3O95817 575 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 UQCRFS1P1P0C7P4 283 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 CYP7A1P22680 504 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 ATP2B2Q01814 1243 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 RAB3GAP1Q15042 981 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 LBX2Q6XYB7 198 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 CCAR1Q8IX12 1150 aaKnown RBP11.98□□□□□ -0.49
COL4A5-204ENST00000477429 MOV10L1Q9BXT6 1211 aaKnown RBP11.98□□□□□ -0.49
COL4A5-204ENST00000477429 KIAA1683Q9H0B3 1180 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 ANTXR1Q9H6X2 564 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 PRDM5Q9NQX1 630 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-204ENST00000477429 EPG5Q9HCE0 2579 aa11.98□□□□□ -0.49
COL4A5-204ENST00000477429 KMT2BQ9UMN6 2715 aaPredicted RBP11.97□□□□□ -0.49
COL4A5-204ENST00000477429 KRT37O76014 449 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 GNAI3P08754 354 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 TRIM27P14373 513 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 ADORA2AP29274 412 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 ADCYAP1R1P41586 468 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 POLA2Q14181 598 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 SNX17Q15036 470 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 FAM47AQ5JRC9 791 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 TMEM31Q5JXX7 168 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 TTC39AQ5SRH9 613 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 CLEC10AQ8IUN9 316 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 LENG1Q96BZ8 264 aaPredicted RBP11.97□□□□□ -0.49
COL4A5-204ENST00000477429 FEZ1Q99689 392 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 DBNLQ9UJU6 430 aaKnown RBP11.97□□□□□ -0.49
COL4A5-204ENST00000477429 CHD9Q3L8U1 2897 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 ZFHX4Q86UP3 3567 aa11.97□□□□□ -0.49
COL4A5-204ENST00000477429 BCAR3O75815 825 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 TAL1P17542 331 aaPredicted RBP11.96□□□□□ -0.49
COL4A5-204ENST00000477429 G3BP1Q13283 466 aaKnown RBP eCLIP11.96□□□□□ -0.49
COL4A5-204ENST00000477429 GRIN2CQ14957 1233 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 SEPT2Q15019 361 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 LRRC41Q15345 812 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 SIAH1Q8IUQ4 282 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 GTF3C2Q8WUA4 911 aaPredicted RBP11.96□□□□□ -0.49
COL4A5-204ENST00000477429 CLUAP1Q96AJ1 413 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 NOL10Q9BSC4 688 aaKnown RBP11.96□□□□□ -0.49
COL4A5-204ENST00000477429 TRIM34Q9BYJ4 488 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 CCDC8Q9H0W5 538 aaPredicted RBP11.96□□□□□ -0.49
COL4A5-204ENST00000477429 C1orf115Q9H7X2 142 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 CWC22Q9HCG8 908 aaKnown RBP11.96□□□□□ -0.49
COL4A5-204ENST00000477429 GINM1Q9NU53 330 aa11.96□□□□□ -0.49
COL4A5-204ENST00000477429 FAM86C2PA6NEL3 165 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 ZNF316A6NFI3 1004 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-204ENST00000477429 GNAI2P04899 355 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 HLA-DOAP06340 250 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 CYP2D6P10635 497 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 PLCG2P16885 1265 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 ERCC3P19447 782 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-204ENST00000477429 SMAD3P84022 425 aaKnown RBP11.95□□□□□ -0.5
COL4A5-204ENST00000477429 NHLH1Q02575 133 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 TLE2Q04725 743 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 GABPAQ06546 454 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 ABCB5Q2M3G0 1257 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 CERKLQ49MI3 558 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-204ENST00000477429 OLFML2BQ68BL8 750 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 ATXN2LQ8WWM7 1075 aaKnown RBP11.95□□□□□ -0.5
COL4A5-204ENST00000477429 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-204ENST00000477429 MYH1P12882 1939 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 XIRP2A4UGR9 3374 aa11.95□□□□□ -0.5
COL4A5-204ENST00000477429 A0A0G2JMZ2 1700 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 REV3LO60673 3130 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 SEPT4O43236 478 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 IDH1O75874 414 aaKnown RBP11.94□□□□□ -0.5
COL4A5-204ENST00000477429 CCNA1P78396 465 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 MAGEB6Q8N7X4 407 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 ARHGAP45Q92619 1136 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 ZNF512BQ96KM6 892 aaPredicted RBP11.94□□□□□ -0.5
COL4A5-204ENST00000477429 RIOK1Q9BRS2 568 aaKnown RBP11.94□□□□□ -0.5
COL4A5-204ENST00000477429 EHD4Q9H223 541 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 SERPINB13Q9UIV8 391 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
COL4A5-204ENST00000477429 C5orf42Q9H799 3197 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 ZNF236Q9UL36 1845 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 MSCO60682 206 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
COL4A5-204ENST00000477429 PGK1P00558 417 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 USP5P45974 858 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 FOXK2Q01167 660 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 DPP9Q86TI2 863 aa11.93□□□□□ -0.5
COL4A5-204ENST00000477429 TMEM57Q8N5G2 664 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms