RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SLC45A1Q9Y2W3 748 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 RLFQ13129 1914 aa14.8□□□□□ -0.04
APTX-220ENST00000476858 CNMDO75829 334 aa14.79□□□□□ -0.04
APTX-220ENST00000476858 ZMYM6O95789 1325 aa14.79□□□□□ -0.04
APTX-220ENST00000476858 FGRP09769 529 aa14.79□□□□□ -0.04
APTX-220ENST00000476858 HOXA7P31268 230 aaPredicted RBP14.79□□□□□ -0.04
APTX-220ENST00000476858 LACTBP83111 547 aaPredicted RBP14.79□□□□□ -0.04
APTX-220ENST00000476858 LAMA4Q16363 1823 aa14.79□□□□□ -0.04
APTX-220ENST00000476858 LRRC47Q8N1G4 583 aaKnown RBP14.79□□□□□ -0.04
APTX-220ENST00000476858 RPAP3Q9H6T3 665 aaPredicted RBP14.79□□□□□ -0.04
APTX-220ENST00000476858 TMX2Q9Y320 296 aa14.79□□□□□ -0.04
APTX-220ENST00000476858 TRIM17Q9Y577 477 aa14.79□□□□□ -0.04
APTX-220ENST00000476858 HIP1O00291 1037 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 HERVK_113P62684 666 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 Q3C1V9 767 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 BMP2KLQ5H9B9 411 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 RRP12Q5JTH9 1297 aaKnown RBP14.78□□□□□ -0.04
APTX-220ENST00000476858 CATSPERGQ6ZRH7 1159 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 ZNF444Q8N0Y2 327 aaPredicted RBP14.78□□□□□ -0.04
APTX-220ENST00000476858 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 ABHD8Q96I13 439 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 DSCC1Q9BVC3 393 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 VCPKMTQ9H867 229 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 KANSL2Q9H9L4 492 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 FBXO28Q9NVF7 368 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 MTMR4Q9NYA4 1195 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 RBPJLQ9UBG7 517 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 CLIP2Q9UDT6 1046 aa14.78□□□□□ -0.04
APTX-220ENST00000476858 PLIN4Q96Q06 1357 aa14.77□□□□□ -0.04
APTX-220ENST00000476858 ORC4O43929 436 aa14.77□□□□□ -0.05
APTX-220ENST00000476858 SMCR8Q8TEV9 937 aaPredicted RBP14.77□□□□□ -0.05
APTX-220ENST00000476858 BTBD7Q9P203 1132 aa14.77□□□□□ -0.05
APTX-220ENST00000476858 GABRQQ9UN88 632 aa14.77□□□□□ -0.05
APTX-220ENST00000476858 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
APTX-220ENST00000476858 RAD21O60216 631 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 RANBP6O60518 1105 aaKnown RBP14.76□□□□□ -0.05
APTX-220ENST00000476858 TSPY3P0CV98 308 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 TSPY8P0CW00 308 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 OSBPP22059 807 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 PSMC4P43686 418 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 IRX3P78415 501 aaPredicted RBP14.76□□□□□ -0.05
APTX-220ENST00000476858 PDE4BQ07343 736 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 FAM83BQ5T0W9 1011 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 AKNAD1Q5T1N1 836 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 STOX1Q6ZVD7 989 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 STAG1Q8WVM7 1258 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 ERO1AQ96HE7 468 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 ZKSCAN3Q9BRR0 538 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 ESYT1Q9BSJ8 1104 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 PAGR1Q9BTK6 254 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 LSG1Q9H089 658 aaKnown RBP14.76□□□□□ -0.05
APTX-220ENST00000476858 EFCC1Q9HA90 598 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 ARHGEF10LQ9HCE6 1279 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 TOMM22Q9NS69 142 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 NYAP2Q9P242 653 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 PARP14Q460N5 1801 aa14.76□□□□□ -0.05
APTX-220ENST00000476858 RAD50Q92878 1312 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 MYH4Q9Y623 1939 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L15C9J2P7 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L13C9JLJ4 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L11C9JVI0 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L18D6R9N7 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L22D6RA61 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L17D6RBQ6 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L19D6RCP7 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L20D6RJB6 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 NDUFB10O96000 172 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP14P54578 494 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 USP17L24Q0WX57 530 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 RCSD1Q6JBY9 416 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 PORCNQ9H237 461 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 HPS5Q9UPZ3 1129 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 PTCH2Q9Y6C5 1203 aa14.75□□□□□ -0.05
APTX-220ENST00000476858 MGAMO43451 1857 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 TSPY2A6NKD2 308 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 B4E1Z4 1266 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 F5H6K3 240 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 SLC3A2P08195 630 aaKnown RBP14.74□□□□□ -0.05
APTX-220ENST00000476858 CYP21A2P08686 494 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 MFAP1P55081 439 aaKnown RBP14.74□□□□□ -0.05
APTX-220ENST00000476858 KLRC3Q07444 240 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 ATG4CQ96DT6 458 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 TANGO6Q9C0B7 1094 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 MORF4L1Q9UBU8 362 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 PNMA3Q9UL41 463 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 PTPN22Q9Y2R2 807 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 FARP1Q9Y4F1 1045 aaPredicted RBP14.74□□□□□ -0.05
APTX-220ENST00000476858 CENPFP49454 3210 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 A0A0G2JMZ2 1700 aa14.74□□□□□ -0.05
APTX-220ENST00000476858 PLXNB2O15031 1838 aa14.73□□□□□ -0.05
APTX-220ENST00000476858 ZNF213O14771 459 aa14.73□□□□□ -0.05
APTX-220ENST00000476858 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
APTX-220ENST00000476858 NOVP48745 357 aa14.73□□□□□ -0.05
APTX-220ENST00000476858 PRKCZQ05513 592 aa14.73□□□□□ -0.05
APTX-220ENST00000476858 PABPC4Q13310 644 aaKnown RBP eCLIP14.73□□□□□ -0.05
APTX-220ENST00000476858 FAM110CQ1W6H9 321 aa14.73□□□□□ -0.05
APTX-220ENST00000476858 MFSD6Q6ZSS7 791 aa14.73□□□□□ -0.05
APTX-220ENST00000476858 CYB5R4Q7L1T6 521 aa14.73□□□□□ -0.05
APTX-220ENST00000476858 MAP4K1Q92918 833 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms