RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 RTL9Q8NET4 1388 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 TRAF5O00463 557 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 PSMD14O00487 310 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 EGFRP00533 1210 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 KLRK1P26718 216 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 SLFN5Q08AF3 891 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 SPEM2Q0P670 501 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 CIAPIN1Q6FI81 312 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 SLC4A10Q6U841 1118 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 DLK2Q6UY11 383 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 TMC4Q7Z404 712 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 ANKRD18AQ8IVF6 992 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 CHMP4AQ9BY43 222 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 GPRC5DQ9NZD1 345 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 ANKIB1Q9P2G1 1089 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 MKRN1Q9UHC7 482 aaKnown RBP10.04□□□□□ -0.8
CHD6-207ENST00000476641 NOD1Q9Y239 953 aa10.04□□□□□ -0.8
CHD6-207ENST00000476641 SNAP23O00161 211 aa10.03□□□□□ -0.8
CHD6-207ENST00000476641 ECE2O60344 883 aa10.03□□□□□ -0.8
CHD6-207ENST00000476641 NID1P14543 1247 aa10.03□□□□□ -0.8
CHD6-207ENST00000476641 LMOD1P29536 600 aaPredicted RBP10.03□□□□□ -0.8
CHD6-207ENST00000476641 HIRAP54198 1017 aaPredicted RBP10.03□□□□□ -0.8
CHD6-207ENST00000476641 TBCELQ5QJ74 424 aa10.03□□□□□ -0.8
CHD6-207ENST00000476641 RAB44Q7Z6P3 723 aaPredicted RBP10.03□□□□□ -0.8
CHD6-207ENST00000476641 SLC9A9Q8IVB4 645 aa10.03□□□□□ -0.8
CHD6-207ENST00000476641 CNTROBQ8N137 903 aa10.03□□□□□ -0.8
CHD6-207ENST00000476641 SSH1Q8WYL5 1049 aa10.03□□□□□ -0.8
CHD6-207ENST00000476641 MINPP1Q9UNW1 487 aa10.03□□□□□ -0.8
CHD6-207ENST00000476641 GPC6Q9Y625 555 aaPredicted RBP10.03□□□□□ -0.8
CHD6-207ENST00000476641 ADAMTSL1Q8N6G6 1762 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 E9PSI1 815 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 CCER2I3L3R5 266 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 EPHA4P54764 986 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 FOXO4P98177 505 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 TXNRD3Q86VQ6 643 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 CDC5LQ99459 802 aaKnown RBP10.02□□□□□ -0.81
CHD6-207ENST00000476641 MXD3Q9BW11 206 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 PLA2G12BQ9BX93 195 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 VPS33BQ9H267 617 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 PODXL2Q9NZ53 605 aa10.02□□□□□ -0.81
CHD6-207ENST00000476641 CSF1RP07333 972 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 SKIP12755 728 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 HSP90B1P14625 803 aaKnown RBP10.01□□□□□ -0.81
CHD6-207ENST00000476641 TBC1D10BQ4KMP7 808 aaPredicted RBP10.01□□□□□ -0.81
CHD6-207ENST00000476641 NBPF11Q86T75 865 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 PNMA8AQ86V59 439 aaPredicted RBP10.01□□□□□ -0.81
CHD6-207ENST00000476641 KRTAP1-3Q8IUG1 177 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 TNS4Q8IZW8 715 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 RHPN1Q8TCX5 695 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 SUCLG2Q96I99 432 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 ZNF594Q96JF6 807 aaPredicted RBP10.01□□□□□ -0.81
CHD6-207ENST00000476641 BSDC1Q9NW68 430 aaPredicted RBP10.01□□□□□ -0.81
CHD6-207ENST00000476641 CNOT7Q9UIV1 285 aaKnown RBP10.01□□□□□ -0.81
CHD6-207ENST00000476641 CHMP3Q9Y3E7 222 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 ASTN2O75129 1339 aaPredicted RBP10.01□□□□□ -0.81
CHD6-207ENST00000476641 XDHP47989 1333 aa10.01□□□□□ -0.81
CHD6-207ENST00000476641 SCN4AP35499 1836 aa10□□□□□ -0.81
CHD6-207ENST00000476641 SERTM1A2A2V5 107 aa10□□□□□ -0.81
CHD6-207ENST00000476641 GRM8O00222 908 aa10□□□□□ -0.81
CHD6-207ENST00000476641 TNIP1Q15025 636 aa10□□□□□ -0.81
CHD6-207ENST00000476641 SH3PXD2AQ5TCZ1 1133 aa10□□□□□ -0.81
CHD6-207ENST00000476641 LMBR1LQ6UX01 489 aa10□□□□□ -0.81
CHD6-207ENST00000476641 KAZALD1Q96I82 304 aa10□□□□□ -0.81
CHD6-207ENST00000476641 EYA3Q99504 573 aa10□□□□□ -0.81
CHD6-207ENST00000476641 GLIS2Q9BZE0 524 aaPredicted RBP10□□□□□ -0.81
CHD6-207ENST00000476641 ZC3H12CQ9C0D7 883 aaKnown RBP10□□□□□ -0.81
CHD6-207ENST00000476641 ADARB2Q9NS39 739 aaKnown RBP10□□□□□ -0.81
CHD6-207ENST00000476641 SCN9AQ15858 1988 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 C9orf172C9J069 976 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 TAF5LO75529 589 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 NBPF7P0C2Y1 421 aaPredicted RBP9.99□□□□□ -0.81
CHD6-207ENST00000476641 ATP2B4P23634 1241 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 IGHMBP2P38935 993 aaKnown RBP9.99□□□□□ -0.81
CHD6-207ENST00000476641 CCT4P50991 539 aaKnown RBP9.99□□□□□ -0.81
CHD6-207ENST00000476641 NCOA4Q13772 614 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 C20orf204Q6ZNR8 217 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 USP50Q70EL3 339 aaPredicted RBP9.99□□□□□ -0.81
CHD6-207ENST00000476641 TRMT2AQ8IZ69 625 aaKnown RBP9.99□□□□□ -0.81
CHD6-207ENST00000476641 JMYQ8N9B5 988 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 CEP63Q96MT8 703 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 SRCIN1Q9C0H9 1055 aa9.99□□□□□ -0.81
CHD6-207ENST00000476641 ANKRD18BA2A2Z9 1011 aa9.98□□□□□ -0.81
CHD6-207ENST00000476641 TMEM88BA6NKF7 163 aa9.98□□□□□ -0.81
CHD6-207ENST00000476641 LZTS3O60299 673 aaPredicted RBP9.98□□□□□ -0.81
CHD6-207ENST00000476641 VIL1P09327 827 aaKnown RBP9.98□□□□□ -0.81
CHD6-207ENST00000476641 CHRNDQ07001 517 aa9.98□□□□□ -0.81
CHD6-207ENST00000476641 CST9Q5W186 159 aa9.98□□□□□ -0.81
CHD6-207ENST00000476641 DIEXFQ68CQ4 756 aaKnown RBP9.98□□□□□ -0.81
CHD6-207ENST00000476641 HSH2DQ96JZ2 352 aa9.98□□□□□ -0.81
CHD6-207ENST00000476641 BRD7Q9NPI1 651 aa9.98□□□□□ -0.81
CHD6-207ENST00000476641 SMC4Q9NTJ3 1288 aa9.98□□□□□ -0.81
CHD6-207ENST00000476641 C9orf78Q9NZ63 289 aaPredicted RBP9.98□□□□□ -0.81
CHD6-207ENST00000476641 SCAF8Q9UPN6 1271 aaKnown RBP9.98□□□□□ -0.81
CHD6-207ENST00000476641 CNTNAP1P78357 1384 aa9.98□□□□□ -0.81
CHD6-207ENST00000476641 ADM5C9JUS6 153 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 ALDH1L1O75891 902 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 H2AFB1P0C5Y9 115 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 H2AFB2P0C5Z0 115 aa9.97□□□□□ -0.81
CHD6-207ENST00000476641 ADGRE1Q14246 886 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms