RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 DHX32Q7L7V1 743 aaKnown RBP26.08■■□□□ 1.77
MCF2L2-209ENST00000475664 LRRC47Q8N1G4 583 aaKnown RBP26.08■■□□□ 1.77
MCF2L2-209ENST00000475664 DNAJC5GQ8N7S2 189 aa26.08■■□□□ 1.77
MCF2L2-209ENST00000475664 BRI3BPQ8WY22 251 aa26.08■■□□□ 1.77
MCF2L2-209ENST00000475664 C12orf42Q96LP6 360 aa26.08■■□□□ 1.77
MCF2L2-209ENST00000475664 EMILIN3Q9NT22 766 aa26.08■■□□□ 1.77
MCF2L2-209ENST00000475664 IFIT3O14879 490 aaKnown RBP26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 TOP1P11387 765 aaKnown RBP26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 CASTP20810 708 aaKnown RBP26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 MAP2K2P36507 400 aa26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 USP14P54578 494 aa26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 ZYXQ15942 572 aaKnown RBP26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 BLOC1S2Q6QNY1 142 aa26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 IGDCC4Q8TDY8 1250 aa26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 TMEM47Q9BQJ4 181 aa26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 VCPKMTQ9H867 229 aa26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 ZSWIM6Q9HCJ5 1215 aa26.07■■□□□ 1.76
MCF2L2-209ENST00000475664 CPA1P15085 419 aa26.06■■□□□ 1.76
MCF2L2-209ENST00000475664 SREBF2Q12772 1141 aa26.06■■□□□ 1.76
MCF2L2-209ENST00000475664 SART3Q15020 963 aaKnown RBP26.06■■□□□ 1.76
MCF2L2-209ENST00000475664 KIAA1755Q5JYT7 1200 aa26.06■■□□□ 1.76
MCF2L2-209ENST00000475664 FASTKD5Q7L8L6 764 aaKnown RBP26.06■■□□□ 1.76
MCF2L2-209ENST00000475664 PROCA1Q8NCQ7 364 aaPredicted RBP26.06■■□□□ 1.76
MCF2L2-209ENST00000475664 TMEM87BQ96K49 555 aa26.06■■□□□ 1.76
MCF2L2-209ENST00000475664 RPS6KB1P23443 525 aa26.05■■□□□ 1.76
MCF2L2-209ENST00000475664 INHBEP58166 350 aa26.05■■□□□ 1.76
MCF2L2-209ENST00000475664 TMEM67Q5HYA8 995 aa26.05■■□□□ 1.76
MCF2L2-209ENST00000475664 GADL1Q6ZQY3 521 aa26.05■■□□□ 1.76
MCF2L2-209ENST00000475664 TCEANC2Q96MN5 208 aa26.05■■□□□ 1.76
MCF2L2-209ENST00000475664 GOPCQ9HD26 462 aa26.05■■□□□ 1.76
MCF2L2-209ENST00000475664 TMOD4Q9NZQ9 345 aa26.05■■□□□ 1.76
MCF2L2-209ENST00000475664 ERICH2A1L162 156 aa26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 SH2B2O14492 632 aaPredicted RBP26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 TM4SF4P48230 202 aa26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 GPAT2Q6NUI2 795 aa26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 REM2Q8IYK8 340 aaPredicted RBP26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 GMCL1P1Q8NEA9 526 aa26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 LPAR1Q92633 364 aa26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 TBC1D32Q96NH3 1257 aa26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 PTPN18Q99952 460 aa26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 LRRC2Q9BYS8 371 aa26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 GPHNQ9NQX3 736 aaPredicted RBP26.04■■□□□ 1.76
MCF2L2-209ENST00000475664 F5H6K3 240 aa26.03■■□□□ 1.76
MCF2L2-209ENST00000475664 VCAM1P19320 739 aa26.03■■□□□ 1.76
MCF2L2-209ENST00000475664 KLRC3Q07444 240 aa26.03■■□□□ 1.76
MCF2L2-209ENST00000475664 WTAPQ15007 396 aa26.03■■□□□ 1.76
MCF2L2-209ENST00000475664 IFIT1BQ5T764 474 aaKnown RBP26.03■■□□□ 1.76
MCF2L2-209ENST00000475664 RUFY3Q7L099 469 aa26.03■■□□□ 1.76
MCF2L2-209ENST00000475664 LY9Q9HBG7 655 aa26.03■■□□□ 1.76
MCF2L2-209ENST00000475664 SENP2Q9HC62 589 aa26.03■■□□□ 1.76
MCF2L2-209ENST00000475664 BTBD19C9JJ37 291 aa26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 IGF2BP3O00425 579 aaKnown RBP eCLIP26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 NDUFB10O96000 172 aa26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 TREML2Q5T2D2 321 aa26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 ANKRD23Q86SG2 305 aa26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 KIF2CQ99661 725 aa26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 UPF3BQ9BZI7 483 aaKnown RBP26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 AGTPBP1Q9UPW5 1226 aa26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 CYP46A1Q9Y6A2 500 aa26.02■■□□□ 1.76
MCF2L2-209ENST00000475664 IFNL1Q8IU54 200 aa26.01■■□□□ 1.75
MCF2L2-209ENST00000475664 SPICE1Q8N0Z3 855 aa26.01■■□□□ 1.75
MCF2L2-209ENST00000475664 FAM43AQ8N2R8 423 aa26.01■■□□□ 1.75
MCF2L2-209ENST00000475664 PNMA1Q8ND90 353 aa26.01■■□□□ 1.75
MCF2L2-209ENST00000475664 KAT14Q9H8E8 782 aa26.01■■□□□ 1.75
MCF2L2-209ENST00000475664 PARP14Q460N5 1801 aa26■■□□□ 1.75
MCF2L2-209ENST00000475664 WDR46O15213 610 aaKnown RBP26■■□□□ 1.75
MCF2L2-209ENST00000475664 LIFRP42702 1097 aa26■■□□□ 1.75
MCF2L2-209ENST00000475664 SLFN13Q68D06 897 aa26■■□□□ 1.75
MCF2L2-209ENST00000475664 FBXL16Q8N461 479 aa25.99■■□□□ 1.75
MCF2L2-209ENST00000475664 GMCL1Q96IK5 515 aa25.99■■□□□ 1.75
MCF2L2-209ENST00000475664 AGXT2Q9BYV1 514 aa25.99■■□□□ 1.75
MCF2L2-209ENST00000475664 ZCCHC17Q9NP64 241 aaKnown RBP25.99■■□□□ 1.75
MCF2L2-209ENST00000475664 SLC45A1Q9Y2W3 748 aa25.99■■□□□ 1.75
MCF2L2-209ENST00000475664 RLFQ13129 1914 aa25.98■■□□□ 1.75
MCF2L2-209ENST00000475664 RAD21O60216 631 aa25.98■■□□□ 1.75
MCF2L2-209ENST00000475664 HOXA7P31268 230 aaPredicted RBP25.98■■□□□ 1.75
MCF2L2-209ENST00000475664 Q6ZUG5 572 aa25.98■■□□□ 1.75
MCF2L2-209ENST00000475664 RASGRP2Q7LDG7 609 aa25.98■■□□□ 1.75
MCF2L2-209ENST00000475664 SGMS1Q86VZ5 419 aa25.98■■□□□ 1.75
MCF2L2-209ENST00000475664 TMTC2Q8N394 836 aa25.98■■□□□ 1.75
MCF2L2-209ENST00000475664 RPAP3Q9H6T3 665 aaPredicted RBP25.98■■□□□ 1.75
MCF2L2-209ENST00000475664 PDHXO00330 501 aa25.97■■□□□ 1.75
MCF2L2-209ENST00000475664 SNHG28P0DPA3 235 aa25.97■■□□□ 1.75
MCF2L2-209ENST00000475664 PDHBP11177 359 aa25.97■■□□□ 1.75
MCF2L2-209ENST00000475664 DCAF4Q8WV16 495 aa25.97■■□□□ 1.75
MCF2L2-209ENST00000475664 NUP88Q99567 741 aaPredicted RBP25.97■■□□□ 1.75
MCF2L2-209ENST00000475664 CEP350Q5VT06 3117 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L15C9J2P7 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L13C9JLJ4 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L11C9JVI0 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L18D6R9N7 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L22D6RA61 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L17D6RBQ6 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L19D6RCP7 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L20D6RJB6 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 USP17L24Q0WX57 530 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 PABPC4Q13310 644 aaKnown RBP eCLIP25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 FAM83BQ5T0W9 1011 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 OTUD7BQ6GQQ9 843 aa25.96■■□□□ 1.75
MCF2L2-209ENST00000475664 PDRG1Q9NUG6 133 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms