RNA–Protein interactions for RNA: ENST00000475211.1

ERGIC3-213, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-213ENST00000475211 VCPKMTQ9H867 229 aa16.19■□□□□ 0.18
ERGIC3-213ENST00000475211 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
ERGIC3-213ENST00000475211 PTPRFP10586 1907 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 PRC1O43663 620 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 TOP1P11387 765 aaKnown RBP16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 ANTXR2P58335 489 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 RCSD1Q6JBY9 416 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 BLOC1S2Q6QNY1 142 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 DHX32Q7L7V1 743 aaKnown RBP16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 DNAJC5GQ8N7S2 189 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 ENAHQ8N8S7 591 aaPredicted RBP16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 TMEM87BQ96K49 555 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 ZKSCAN3Q9BRR0 538 aa16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 ZCCHC17Q9NP64 241 aaKnown RBP16.18■□□□□ 0.18
ERGIC3-213ENST00000475211 IFIT3O14879 490 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 TM4SF4P48230 202 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 PABPC4Q13310 644 aaKnown RBP eCLIP16.17■□□□□ 0.183e-8■■□□□ 11.4
ERGIC3-213ENST00000475211 MOGSQ13724 837 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 SEC23AQ15436 765 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 ZYXQ15942 572 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 OTUD7BQ6GQQ9 843 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 GADL1Q6ZQY3 521 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 ANKRD23Q86SG2 305 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 LRRC47Q8N1G4 583 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 ZIC5Q96T25 663 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 C22orf23Q9BZE7 217 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 EMILIN3Q9NT22 766 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 SLC45A1Q9Y2W3 748 aa16.17■□□□□ 0.18
ERGIC3-213ENST00000475211 ALDH1A1P00352 501 aa16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 VCAM1P19320 739 aa16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 EXOSC10Q01780 885 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 WTAPQ15007 396 aa16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 TMEM67Q5HYA8 995 aa16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 IFIT1BQ5T764 474 aaKnown RBP16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 IFNL1Q8IU54 200 aa16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 TMEM47Q9BQJ4 181 aa16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 KAT14Q9H8E8 782 aa16.16■□□□□ 0.18
ERGIC3-213ENST00000475211 F5H6K3 240 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 SH2B2O14492 632 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 WDR46O15213 610 aaKnown RBP16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 MAP2K1Q02750 393 aaPredicted RBP16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 KLRC3Q07444 240 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 CHST3Q7LGC8 479 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 TMTC2Q8N394 836 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 IGDCC4Q8TDY8 1250 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 GMCL1Q96IK5 515 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 CYP46A1Q9Y6A2 500 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 MYH4Q9Y623 1939 aa16.15■□□□□ 0.18
ERGIC3-213ENST00000475211 BTBD19C9JJ37 291 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 IGF2BP3O00425 579 aaKnown RBP eCLIP16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 NDUFB10O96000 172 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 HOXA7P31268 230 aaPredicted RBP16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 LIFRP42702 1097 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 DGKZQ13574 1117 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 TREML2Q5T2D2 321 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 SLFN13Q68D06 897 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 GPAT2Q6NUI2 795 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 RUFY3Q7L099 469 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 PTPN18Q99952 460 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 PNMA3Q9UL41 463 aa16.14■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L15C9J2P7 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L13C9JLJ4 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L11C9JVI0 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L18D6R9N7 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L22D6RA61 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L17D6RBQ6 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L19D6RCP7 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L20D6RJB6 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 PDHXO00330 501 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 RAD21O60216 631 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 FGD1P98174 961 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 USP17L24Q0WX57 530 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 COL9A3Q14050 684 aaPredicted RBP16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 SGMS1Q86VZ5 419 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 SPICE1Q8N0Z3 855 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 DCAF4Q8WV16 495 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 TBC1D32Q96NH3 1257 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 PARK7Q99497 189 aaKnown RBP16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 LY9Q9HBG7 655 aa16.13■□□□□ 0.17
ERGIC3-213ENST00000475211 OSBPP22059 807 aa16.12■□□□□ 0.17
ERGIC3-213ENST00000475211 SLC1A4P43007 532 aa16.12■□□□□ 0.17
ERGIC3-213ENST00000475211 IRX3P78415 501 aaPredicted RBP16.12■□□□□ 0.17
ERGIC3-213ENST00000475211 KIAA1755Q5JYT7 1200 aa16.12■□□□□ 0.17
ERGIC3-213ENST00000475211 JMYQ8N9B5 988 aa16.12■□□□□ 0.17
ERGIC3-213ENST00000475211 UPF3BQ9BZI7 483 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-213ENST00000475211 TANGO6Q9C0B7 1094 aa16.12■□□□□ 0.17
ERGIC3-213ENST00000475211 SAGE1Q9NXZ1 904 aa16.12■□□□□ 0.17
ERGIC3-213ENST00000475211 CCDC69A6NI79 296 aa16.11■□□□□ 0.17
ERGIC3-213ENST00000475211 CA12O43570 354 aa16.11■□□□□ 0.17
ERGIC3-213ENST00000475211 DDAH1O94760 285 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms