RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ADCY3O60266 1144 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 PEX10O60683 326 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 GLRX3O76003 335 aaKnown RBP11.31□□□□□ -0.6
PDPN-204ENST00000475043 ZFYP08048 801 aaPredicted RBP11.31□□□□□ -0.6
PDPN-204ENST00000475043 HOXB3P14651 431 aaPredicted RBP11.31□□□□□ -0.6
PDPN-204ENST00000475043 UBXN2AP68543 259 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 MTFR1Q15390 333 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 C12orf60Q5U649 245 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 CCAR1Q8IX12 1150 aaKnown RBP11.31□□□□□ -0.6
PDPN-204ENST00000475043 PI4K2BQ8TCG2 481 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 APPBP2Q92624 585 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 GCC1Q96CN9 775 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 STRBPQ96SI9 672 aaKnown RBP11.31□□□□□ -0.6
PDPN-204ENST00000475043 PAGR1Q9BTK6 254 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 KIAA1683Q9H0B3 1180 aa11.31□□□□□ -0.6
PDPN-204ENST00000475043 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 APPP05067 770 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 ELNP15502 786 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 VCAM1P19320 739 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 GUCY1A2P33402 732 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 CDK8P49336 464 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 HDAC1Q13547 482 aaPredicted RBP11.3□□□□□ -0.6
PDPN-204ENST00000475043 CTR9Q6PD62 1173 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 TMEM179Q6ZVK1 233 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 STK11IPQ8N1F8 1099 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 OSBP2Q969R2 916 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
PDPN-204ENST00000475043 MORF4L1Q9UBU8 362 aa11.3□□□□□ -0.6
PDPN-204ENST00000475043 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 M0R2C6 588 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 GPAA1O43292 621 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 CCL5P13501 91 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 AKR1B1P15121 316 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 IRF5Q13568 498 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 AAMPQ13685 434 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 TMEM92Q6UXU6 159 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 GTF3C2Q8WUA4 911 aaPredicted RBP11.29□□□□□ -0.6
PDPN-204ENST00000475043 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 RNF208Q9H0X6 261 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 RPAP3Q9H6T3 665 aaPredicted RBP11.29□□□□□ -0.6
PDPN-204ENST00000475043 ARHGEF10LQ9HCE6 1279 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
PDPN-204ENST00000475043 TXNRD2Q9NNW7 524 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 RBPJLQ9UBG7 517 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 DOCK3Q8IZD9 2030 aa11.29□□□□□ -0.6
PDPN-204ENST00000475043 PLXNB2O15031 1838 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 GSG1L2A8MUP6 293 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 INHAP05111 366 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 GNAT2P19087 354 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 TDO2P48775 406 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 EMP3P54852 163 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 ERVK-24P63145 666 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 ATP2B2Q01814 1243 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 ICA1Q05084 483 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 Q3C1V9 767 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 B4GALNT3Q6L9W6 998 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 EXOC6Q8TAG9 804 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 CCDC17Q96LX7 622 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 SEC62Q99442 399 aaKnown RBP11.28□□□□□ -0.6
PDPN-204ENST00000475043 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 RWDD1Q9H446 243 aaPredicted RBP11.28□□□□□ -0.6
PDPN-204ENST00000475043 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 MKNK2Q9HBH9 465 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 BRCA2P51587 3418 aa11.28□□□□□ -0.6
PDPN-204ENST00000475043 RAD21O60216 631 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 MAPK4P31152 587 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 SBK1Q52WX2 424 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 WDR78Q5VTH9 848 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 SPICE1Q8N0Z3 855 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 LNPKQ9C0E8 428 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 PORCNQ9H237 461 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 RABGAP1Q9Y3P9 1069 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 SUPT16HQ9Y5B9 1047 aaKnown RBP11.27□□□□□ -0.61
PDPN-204ENST00000475043 SALL3Q9BXA9 1300 aa11.27□□□□□ -0.61
PDPN-204ENST00000475043 PATL2C9JE40 543 aaKnown RBP11.26□□□□□ -0.61
PDPN-204ENST00000475043 GJB1P08034 283 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 CYP2B6P20813 491 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 PDE1AP54750 535 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 CCNA1P78396 465 aa11.26□□□□□ -0.61
PDPN-204ENST00000475043 COG2Q14746 738 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms