RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CCDC69A6NI79 296 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 TSPY2A6NKD2 308 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 GOLGA8BA8MQT2 603 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 STX6O43752 255 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 JAK2O60674 1132 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 HLA-DOAP06340 250 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 CALM1P0DP23 149 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 CALM2P0DP24 149 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 CALM3P0DP25 149 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 CDC27P30260 824 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 ADD1P35611 737 aaKnown RBP7.73□□□□□ -1.17
ATG4A-207ENST00000474825 GMPSP49915 693 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-207ENST00000474825 METAP2P50579 478 aaKnown RBP eCLIP7.73□□□□□ -1.17
ATG4A-207ENST00000474825 STK3Q13188 491 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 PICALMQ13492 652 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 FAM47AQ5JRC9 791 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 IFIT1BQ5T764 474 aaKnown RBP7.73□□□□□ -1.17
ATG4A-207ENST00000474825 ZNF654Q8IZM8 581 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 FANCBQ8NB91 859 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 SLC44A5Q8NCS7 719 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 ZKSCAN3Q9BRR0 538 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 NCOA5Q9HCD5 579 aaKnown RBP7.73□□□□□ -1.17
ATG4A-207ENST00000474825 TOMM22Q9NS69 142 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 ADAMTSL1Q8N6G6 1762 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 ZNF541Q9H0D2 1346 aa7.73□□□□□ -1.17
ATG4A-207ENST00000474825 ZC3H4Q9UPT8 1303 aaKnown RBP7.73□□□□□ -1.17
ATG4A-207ENST00000474825 BHMG1C9JSJ3 638 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-207ENST00000474825 CDKL5O76039 1030 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 SNHG28P0DPA3 235 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 ZSCAN22P10073 491 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-207ENST00000474825 SMARCA1P28370 1054 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 RBM5P52756 815 aaKnown RBP eCLIP7.72□□□□□ -1.17
ATG4A-207ENST00000474825 CCT2P78371 535 aaKnown RBP7.72□□□□□ -1.17
ATG4A-207ENST00000474825 NFKBIBQ15653 356 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 C9orf131Q5VYM1 1079 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 SYNE3Q6ZMZ3 975 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 NBPF11Q86T75 865 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 PLPP6Q8IY26 295 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 STK11IPQ8N1F8 1099 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 CRACR2BQ8N4Y2 399 aaPredicted RBP7.72□□□□□ -1.17
ATG4A-207ENST00000474825 MKL1Q969V6 931 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 RBM28Q9NW13 759 aaKnown RBP7.72□□□□□ -1.17
ATG4A-207ENST00000474825 MTMR4Q9NYA4 1195 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 GPRC5DQ9NZD1 345 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 HERC5Q9UII4 1024 aaKnown RBP7.72□□□□□ -1.17
ATG4A-207ENST00000474825 CNOT7Q9UIV1 285 aaKnown RBP7.72□□□□□ -1.17
ATG4A-207ENST00000474825 SYNPO2Q9UMS6 1093 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 KIF3AQ9Y496 699 aa7.72□□□□□ -1.17
ATG4A-207ENST00000474825 SIPA1L1O43166 1804 aa7.71□□□□□ -1.17
ATG4A-207ENST00000474825 ECM29Q5VYK3 1845 aa7.71□□□□□ -1.17
ATG4A-207ENST00000474825 SHTN1A0MZ66 631 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 GOLGA8AA7E2F4 631 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 MYO1BO43795 1136 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 NMT2O60551 498 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 TOMM70O94826 608 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 BAG4O95429 457 aaKnown RBP7.71□□□□□ -1.18
ATG4A-207ENST00000474825 FMNL1O95466 1100 aaPredicted RBP7.71□□□□□ -1.18
ATG4A-207ENST00000474825 TSPY3P0CV98 308 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 TSPY8P0CW00 308 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 TOP1P11387 765 aaKnown RBP7.71□□□□□ -1.18
ATG4A-207ENST00000474825 MCM4P33991 863 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 CACNB3P54284 484 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 RTN1Q16799 776 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 NBPF9Q3BBW0 867 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 LARP1BQ659C4 914 aaKnown RBP7.71□□□□□ -1.18
ATG4A-207ENST00000474825 CPLX2Q6PUV4 134 aaKnown RBP7.71□□□□□ -1.18
ATG4A-207ENST00000474825 NFXL1Q6ZNB6 911 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 CATIPQ7Z7H3 387 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 MICU3Q86XE3 530 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 TEPSINQ96N21 525 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 TMEM47Q9BQJ4 181 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 TMOD2Q9NZR1 351 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 MYH1P12882 1939 aa7.71□□□□□ -1.18
ATG4A-207ENST00000474825 DICER1Q9UPY3 1922 aaKnown RBP7.71□□□□□ -1.18
ATG4A-207ENST00000474825 GREB1LQ9C091 1923 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-207ENST00000474825 PALM3A6NDB9 673 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-207ENST00000474825 CPLX1O14810 134 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 PRPF3O43395 683 aaKnown RBP7.7□□□□□ -1.18
ATG4A-207ENST00000474825 F13A1P00488 732 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 EGFRP00533 1210 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 AKR1B1P15121 316 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 GUCY1A2P33402 732 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 GNAQP50148 359 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 TCP10Q12799 353 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 GRM4Q14833 912 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 TMTC3Q6ZXV5 915 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 SIAH1Q8IUQ4 282 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 FAM177A1Q8N128 213 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-207ENST00000474825 PNMA1Q8ND90 353 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 FBXO18Q8NFZ0 1043 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 CEP95Q96GE4 821 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 GBP4Q96PP9 640 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 CSRNP1Q96S65 589 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 RNF26Q9BY78 433 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-207ENST00000474825 GINM1Q9NU53 330 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 RNF181Q9P0P0 153 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 NYAP2Q9P242 653 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 ORC3Q9UBD5 711 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-207ENST00000474825 PITPNM2Q9BZ72 1349 aa7.7□□□□□ -1.18
ATG4A-207ENST00000474825 SBF1O95248 1867 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms