RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 GIMAP6Q6P9H5 292 aa24.43■■□□□ 1.5
PDLIM4-206ENST00000474421 CTR9Q6PD62 1173 aa24.43■■□□□ 1.5
PDLIM4-206ENST00000474421 APPBP2Q92624 585 aa24.43■■□□□ 1.5
PDLIM4-206ENST00000474421 STRBPQ96SI9 672 aaKnown RBP24.43■■□□□ 1.5
PDLIM4-206ENST00000474421 TANGO6Q9C0B7 1094 aa24.43■■□□□ 1.5
PDLIM4-206ENST00000474421 TMX2Q9Y320 296 aa24.43■■□□□ 1.5
PDLIM4-206ENST00000474421 IVNS1ABPQ9Y6Y0 642 aa24.43■■□□□ 1.5
PDLIM4-206ENST00000474421 CYP2D7A0A087X1C5 515 aa24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 SLC15A5A6NIM6 579 aa24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 ERC2O15083 957 aa24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 RNF113AO15541 343 aaKnown RBP24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 RRP1P56182 461 aaKnown RBP24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 MAP2K5Q13163 448 aa24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 WDR78Q5VTH9 848 aa24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 NECAB2Q7Z6G3 386 aa24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 BTBD7Q9P203 1132 aa24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 PCDHB15Q9Y5E8 787 aa24.42■■□□□ 1.5
PDLIM4-206ENST00000474421 MB21D1Q8N884 522 aa24.41■■□□□ 1.5
PDLIM4-206ENST00000474421 VCPKMTQ9H867 229 aa24.41■■□□□ 1.5
PDLIM4-206ENST00000474421 KANSL2Q9H9L4 492 aa24.41■■□□□ 1.5
PDLIM4-206ENST00000474421 GNAT2P19087 354 aa24.4■■□□□ 1.5
PDLIM4-206ENST00000474421 PTPREP23469 700 aa24.4■■□□□ 1.5
PDLIM4-206ENST00000474421 SBK1Q52WX2 424 aa24.4■■□□□ 1.5
PDLIM4-206ENST00000474421 TSHZ3Q63HK5 1081 aa24.4■■□□□ 1.5
PDLIM4-206ENST00000474421 PAWRQ96IZ0 340 aaKnown RBP24.4■■□□□ 1.5
PDLIM4-206ENST00000474421 COLQQ9Y215 455 aaPredicted RBP24.4■■□□□ 1.5
PDLIM4-206ENST00000474421 SIAH1Q8IUQ4 282 aa24.39■■□□□ 1.49
PDLIM4-206ENST00000474421 OSBP2Q969R2 916 aa24.39■■□□□ 1.49
PDLIM4-206ENST00000474421 PCDH10Q9P2E7 1040 aa24.39■■□□□ 1.49
PDLIM4-206ENST00000474421 ZBTB47Q9UFB7 747 aaPredicted RBP24.39■■□□□ 1.49
PDLIM4-206ENST00000474421 RLFQ13129 1914 aa24.38■■□□□ 1.49
PDLIM4-206ENST00000474421 GSG1L2A8MUP6 293 aa24.38■■□□□ 1.49
PDLIM4-206ENST00000474421 WDR46O15213 610 aaKnown RBP24.38■■□□□ 1.49
PDLIM4-206ENST00000474421 EVI5O60447 810 aa24.38■■□□□ 1.49
PDLIM4-206ENST00000474421 FLOT1O75955 427 aa24.38■■□□□ 1.49
PDLIM4-206ENST00000474421 CACNB2Q08289 660 aaPredicted RBP24.38■■□□□ 1.49
PDLIM4-206ENST00000474421 GRB14Q14449 540 aa24.38■■□□□ 1.49
PDLIM4-206ENST00000474421 OGDHLQ9ULD0 1010 aa24.38■■□□□ 1.49
PDLIM4-206ENST00000474421 SMIM22K7EJ46 135 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 STRNO43815 780 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 HOXC6P09630 235 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 DSG3P32926 999 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 CCL14Q16627 93 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 MFSD14CQ5VZR4 134 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 CLEC10AQ8IUN9 316 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 SPICE1Q8N0Z3 855 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 SHCBP1Q8NEM2 672 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 NBPF3Q9H094 633 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 SPATC1LQ9H0A9 340 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 GOPCQ9HD26 462 aa24.37■■□□□ 1.49
PDLIM4-206ENST00000474421 A0A0G2JMZ2 1700 aa24.36■■□□□ 1.49
PDLIM4-206ENST00000474421 GPAA1O43292 621 aa24.36■■□□□ 1.49
PDLIM4-206ENST00000474421 EEF2P13639 858 aaKnown RBP24.36■■□□□ 1.49
PDLIM4-206ENST00000474421 ATP2B2Q01814 1243 aa24.36■■□□□ 1.49
PDLIM4-206ENST00000474421 KIAA1755Q5JYT7 1200 aa24.36■■□□□ 1.49
PDLIM4-206ENST00000474421 MOV10L1Q9BXT6 1211 aaKnown RBP24.36■■□□□ 1.49
PDLIM4-206ENST00000474421 MKNK2Q9HBH9 465 aa24.36■■□□□ 1.49
PDLIM4-206ENST00000474421 ZNF287Q9HBT7 754 aa24.36■■□□□ 1.49
PDLIM4-206ENST00000474421 ROBO3Q96MS0 1386 aa24.35■■□□□ 1.49
PDLIM4-206ENST00000474421 MINDY4BA8MYZ0 360 aa24.35■■□□□ 1.49
PDLIM4-206ENST00000474421 TDO2P48775 406 aa24.35■■□□□ 1.49
PDLIM4-206ENST00000474421 DIS3LQ8TF46 1054 aaKnown RBP24.35■■□□□ 1.49
PDLIM4-206ENST00000474421 APPP05067 770 aa24.34■■□□□ 1.49
PDLIM4-206ENST00000474421 MX1P20591 662 aa24.34■■□□□ 1.49
PDLIM4-206ENST00000474421 CHRDL2Q6WN34 429 aa24.34■■□□□ 1.49
PDLIM4-206ENST00000474421 PI4K2BQ8TCG2 481 aa24.34■■□□□ 1.49
PDLIM4-206ENST00000474421 NACAP1Q9BZK3 213 aa24.34■■□□□ 1.49
PDLIM4-206ENST00000474421 MROH8Q9H579 483 aa24.34■■□□□ 1.49
PDLIM4-206ENST00000474421 TRIOBPQ9H2D6 2365 aa24.34■■□□□ 1.49
PDLIM4-206ENST00000474421 PARP14Q460N5 1801 aa24.33■■□□□ 1.49
PDLIM4-206ENST00000474421 ZNF236Q9UL36 1845 aa24.33■■□□□ 1.49
PDLIM4-206ENST00000474421 PATL2C9JE40 543 aaKnown RBP24.33■■□□□ 1.49
PDLIM4-206ENST00000474421 DPP9Q86TI2 863 aa24.33■■□□□ 1.49
PDLIM4-206ENST00000474421 FSD1Q9BTV5 496 aa24.33■■□□□ 1.49
PDLIM4-206ENST00000474421 C11orf49Q9H6J7 331 aa24.33■■□□□ 1.49
PDLIM4-206ENST00000474421 SLC5A4Q9NY91 659 aa24.33■■□□□ 1.49
PDLIM4-206ENST00000474421 GREB1LQ9C091 1923 aaPredicted RBP24.33■■□□□ 1.49
PDLIM4-206ENST00000474421 M0R2C6 588 aa24.32■■□□□ 1.48
PDLIM4-206ENST00000474421 ERCC3P19447 782 aa24.32■■□□□ 1.48
PDLIM4-206ENST00000474421 RASA1P20936 1047 aa24.32■■□□□ 1.48
PDLIM4-206ENST00000474421 CCND3P30281 292 aaPredicted RBP24.32■■□□□ 1.48
PDLIM4-206ENST00000474421 PLS1Q14651 629 aa24.32■■□□□ 1.48
PDLIM4-206ENST00000474421 ABRAQ8N0Z2 381 aa24.32■■□□□ 1.48
PDLIM4-206ENST00000474421 ATG4CQ96DT6 458 aa24.32■■□□□ 1.48
PDLIM4-206ENST00000474421 CRBNQ96SW2 442 aa24.32■■□□□ 1.48
PDLIM4-206ENST00000474421 MSCO60682 206 aa24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 SLC25A27O95847 323 aa24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 ADORA2AP29274 412 aa24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 MNX1P50219 401 aaPredicted RBP24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 OTUD7AQ8TE49 926 aaPredicted RBP24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 EPB41L4AQ9HCS5 686 aaPredicted RBP24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 FLRT1Q9NZU1 646 aa24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 ALPK3Q96L96 1907 aa24.31■■□□□ 1.48
PDLIM4-206ENST00000474421 FXR1P51114 621 aaKnown RBP eCLIP24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 AAMPQ13685 434 aa24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 LHX8Q68G74 356 aa24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 SAMD1Q6SPF0 538 aaPredicted RBP24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 NCAPG2Q86XI2 1143 aa24.3■■□□□ 1.48
PDLIM4-206ENST00000474421 IFNL3Q8IZI9 196 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms