RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 ZSCAN10Q96SZ4 725 aaPredicted RBP21.36■■□□□ 1.01
SNRPB-203ENST00000474384 VCPKMTQ9H867 229 aa21.36■■□□□ 1.01
SNRPB-203ENST00000474384 LOC285556D6RIA3 1793 aa21.36■■□□□ 1.01
SNRPB-203ENST00000474384 EIF5BO60841 1220 aaKnown RBP21.35■■□□□ 1.01
SNRPB-203ENST00000474384 ALDH1A1P00352 501 aa21.35■■□□□ 1.01
SNRPB-203ENST00000474384 NOVP48745 357 aa21.35■■□□□ 1.01
SNRPB-203ENST00000474384 RCSD1Q6JBY9 416 aa21.35■■□□□ 1.01
SNRPB-203ENST00000474384 CHST3Q7LGC8 479 aa21.35■■□□□ 1.01
SNRPB-203ENST00000474384 SPICE1Q8N0Z3 855 aa21.35■■□□□ 1.01
SNRPB-203ENST00000474384 GOPCQ9HD26 462 aa21.35■■□□□ 1.01
SNRPB-203ENST00000474384 SNX14Q9Y5W7 946 aa21.35■■□□□ 1.01
SNRPB-203ENST00000474384 F5H6K3 240 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 VCAM1P19320 739 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 KLRC3Q07444 240 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 COL9A3Q14050 684 aaPredicted RBP21.34■■□□□ 1.01
SNRPB-203ENST00000474384 ADCK5Q3MIX3 580 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 CCDC178Q5BJE1 867 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 TTC14Q96N46 770 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 NEK1Q96PY6 1258 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 TMEM47Q9BQJ4 181 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 UBAC1Q9BSL1 405 aa21.34■■□□□ 1.01
SNRPB-203ENST00000474384 ZCCHC17Q9NP64 241 aaKnown RBP21.34■■□□□ 1.01
SNRPB-203ENST00000474384 TNKSO95271 1327 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 TBC1D8O95759 1140 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 MCCP23508 829 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 ANTXR2P58335 489 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 PABPC4Q13310 644 aaKnown RBP eCLIP21.33■■□□□ 1.016e-8■■□□□ 13.9
SNRPB-203ENST00000474384 KRT32Q14532 448 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 TAF1CQ15572 869 aaPredicted RBP21.33■■□□□ 1.01
SNRPB-203ENST00000474384 DGKHQ86XP1 1220 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 LPAR1Q92633 364 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 RPAP3Q9H6T3 665 aaPredicted RBP21.33■■□□□ 1.01
SNRPB-203ENST00000474384 TSKSQ9UJT2 592 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 SLC45A1Q9Y2W3 748 aa21.33■■□□□ 1.01
SNRPB-203ENST00000474384 CA12O43570 354 aa21.32■■□□□ 1
SNRPB-203ENST00000474384 HSPA1AP0DMV8 641 aaKnown RBP21.32■■□□□ 1
SNRPB-203ENST00000474384 HSPA1BP0DMV9 641 aaKnown RBP21.32■■□□□ 1
SNRPB-203ENST00000474384 CYP2C8P10632 490 aa21.32■■□□□ 1
SNRPB-203ENST00000474384 TOP1P11387 765 aaKnown RBP21.32■■□□□ 1
SNRPB-203ENST00000474384 HOXA7P31268 230 aaPredicted RBP21.32■■□□□ 1
SNRPB-203ENST00000474384 MCM5P33992 734 aa21.32■■□□□ 1
SNRPB-203ENST00000474384 CRHR2Q13324 411 aa21.32■■□□□ 1
SNRPB-203ENST00000474384 ENAHQ8N8S7 591 aaPredicted RBP21.32■■□□□ 1
SNRPB-203ENST00000474384 CHMP4CQ96CF2 233 aa21.32■■□□□ 1
SNRPB-203ENST00000474384 R3HDMLQ9H3Y0 253 aa21.32■■□□□ 1
SNRPB-203ENST00000474384 SAGE1Q9NXZ1 904 aa21.32■■□□□ 1
SNRPB-203ENST00000474384 SYNPO2Q9UMS6 1093 aa21.32■■□□□ 1
SNRPB-203ENST00000474384 USP17L15C9J2P7 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 USP17L13C9JLJ4 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 USP17L11C9JVI0 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 USP17L18D6R9N7 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 USP17L22D6RA61 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 USP17L17D6RBQ6 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 USP17L19D6RCP7 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 USP17L20D6RJB6 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 IFIT3O14879 490 aaKnown RBP21.31■■□□□ 1
SNRPB-203ENST00000474384 PRC1O43663 620 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 NDUFB10O96000 172 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 OSBPP22059 807 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 USP17L24Q0WX57 530 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 SEC23AQ15436 765 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 GMCL1P1Q8NEA9 526 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 ANKS1AQ92625 1134 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 JAKMIP1Q96N16 626 aaKnown RBP21.31■■□□□ 1
SNRPB-203ENST00000474384 NUP88Q99567 741 aaPredicted RBP21.31■■□□□ 1
SNRPB-203ENST00000474384 ASCC2Q9H1I8 757 aaPredicted RBP21.31■■□□□ 1
SNRPB-203ENST00000474384 ZFYVE28Q9HCC9 887 aa21.31■■□□□ 1
SNRPB-203ENST00000474384 WDR46O15213 610 aaKnown RBP21.3■■□□□ 1
SNRPB-203ENST00000474384 SLFN13Q68D06 897 aa21.3■■□□□ 1
SNRPB-203ENST00000474384 CATSPERGQ6ZRH7 1159 aa21.3■■□□□ 1
SNRPB-203ENST00000474384 PARK7Q99497 189 aaKnown RBP21.3■■□□□ 1
SNRPB-203ENST00000474384 TANGO6Q9C0B7 1094 aa21.3■■□□□ 1
SNRPB-203ENST00000474384 PNMA3Q9UL41 463 aa21.3■■□□□ 1
SNRPB-203ENST00000474384 MTMR7Q9Y216 660 aa21.3■■□□□ 1
SNRPB-203ENST00000474384 ERICH2A1L162 156 aa21.29■■□□□ 1
SNRPB-203ENST00000474384 FOXN1O15353 648 aa21.29■■□□□ 1
SNRPB-203ENST00000474384 IRX3P78415 501 aaPredicted RBP21.29■■□□□ 1
SNRPB-203ENST00000474384 SART3Q15020 963 aaKnown RBP21.29■■□□□ 1
SNRPB-203ENST00000474384 FAM83BQ5T0W9 1011 aa21.29■■□□□ 1
SNRPB-203ENST00000474384 IFIT1BQ5T764 474 aaKnown RBP21.29■■□□□ 1
SNRPB-203ENST00000474384 IGDCC4Q8TDY8 1250 aa21.29■■□□□ 1
SNRPB-203ENST00000474384 P2RX7Q99572 595 aaKnown RBP21.29■■□□□ 1
SNRPB-203ENST00000474384 CFHR5Q9BXR6 569 aa21.29■■□□□ 1
SNRPB-203ENST00000474384 KAT14Q9H8E8 782 aa21.29■■□□□ 1
SNRPB-203ENST00000474384 CPA1P15085 419 aa21.28■■□□□ 1
SNRPB-203ENST00000474384 EXOSC10Q01780 885 aaKnown RBP21.28■■□□□ 1
SNRPB-203ENST00000474384 TMEM67Q5HYA8 995 aa21.28■■□□□ 1
SNRPB-203ENST00000474384 DHX32Q7L7V1 743 aaKnown RBP21.28■■□□□ 1
SNRPB-203ENST00000474384 RASGRP2Q7LDG7 609 aa21.28■■□□□ 1
SNRPB-203ENST00000474384 LRRC2Q9BYS8 371 aa21.28■■□□□ 1
SNRPB-203ENST00000474384 SENP2Q9HC62 589 aa21.28■■□□□ 1
SNRPB-203ENST00000474384 GPHNQ9NQX3 736 aaPredicted RBP21.28■■□□□ 1
SNRPB-203ENST00000474384 TLR2O60603 784 aa21.27■■□□□ 1
SNRPB-203ENST00000474384 HMGB1P09429 215 aaKnown RBP21.27■■□□□ 1
SNRPB-203ENST00000474384 WTAPQ15007 396 aa21.27■■□□□ 1
SNRPB-203ENST00000474384 PNMA1Q8ND90 353 aa21.27■■□□□ 1
SNRPB-203ENST00000474384 SMCR8Q8TEV9 937 aaPredicted RBP21.27■■□□□ 1
SNRPB-203ENST00000474384 GMCL1Q96IK5 515 aa21.27■■□□□ 1
SNRPB-203ENST00000474384 TCEANC2Q96MN5 208 aa21.27■■□□□ 1
SNRPB-203ENST00000474384 BMP3P12645 472 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms