RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 TIAM1Q13009 1591 aa6.96□□□□□ -1.29
UFD1-207ENST00000474226 FMN1Q68DA7 1419 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 UPK3BL1B0FP48 263 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 UPK3BL2E5RIL1 263 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 H3BS24 57 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 KIR3DL1P43629 444 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 YARSP54577 528 aaKnown RBP6.96□□□□□ -1.3
UFD1-207ENST00000474226 ERMP1Q7Z2K6 904 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 ATG4DQ86TL0 474 aaPredicted RBP6.96□□□□□ -1.3
UFD1-207ENST00000474226 ATP13A1Q9HD20 1204 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 SEMA3GQ9NS98 782 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 ST14Q9Y5Y6 855 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 FYCO1Q9BQS8 1478 aa6.96□□□□□ -1.3
UFD1-207ENST00000474226 GRIN3BO60391 1043 aa6.95□□□□□ -1.3
UFD1-207ENST00000474226 MPP2Q14168 576 aa6.95□□□□□ -1.3
UFD1-207ENST00000474226 MRPL58Q14197 206 aaKnown RBP6.95□□□□□ -1.3
UFD1-207ENST00000474226 TMEM201Q5SNT2 666 aa6.95□□□□□ -1.3
UFD1-207ENST00000474226 DNAJB8Q8NHS0 232 aa6.95□□□□□ -1.3
UFD1-207ENST00000474226 COPRSQ9NQ92 184 aa6.95□□□□□ -1.3
UFD1-207ENST00000474226 CEP131Q9UPN4 1083 aa6.95□□□□□ -1.3
UFD1-207ENST00000474226 LRRC9Q6ZRR7 1453 aa6.95□□□□□ -1.3
UFD1-207ENST00000474226 MAGI3Q5TCQ9 1506 aa6.95□□□□□ -1.3
UFD1-207ENST00000474226 PRG4Q92954 1404 aaPredicted RBP6.94□□□□□ -1.3
UFD1-207ENST00000474226 PLB1Q6P1J6 1458 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 RBAK-RBAKDNI3L0D1 243 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 TNK2Q07912 1038 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 FAM196AQ6ZSG2 479 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 REC114Q7Z4M0 266 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 THAP5Q7Z6K1 395 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 CYB5D2Q8WUJ1 264 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 KRTAP4-12Q9BQ66 201 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 CARS2Q9HA77 564 aaKnown RBP6.94□□□□□ -1.3
UFD1-207ENST00000474226 GOLGA2P5Q9HBQ8 144 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 LMCD1Q9NZU5 365 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 REV1Q9UBZ9 1251 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
UFD1-207ENST00000474226 MAP3K1Q13233 1512 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 PRR36Q9H6K5 1346 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 PHLDB1Q86UU1 1377 aa6.94□□□□□ -1.3
UFD1-207ENST00000474226 NUP153P49790 1475 aaKnown RBP6.93□□□□□ -1.3
UFD1-207ENST00000474226 CDK13Q14004 1512 aaKnown RBP6.93□□□□□ -1.3
UFD1-207ENST00000474226 TLR3O15455 904 aaKnown RBP6.93□□□□□ -1.3
UFD1-207ENST00000474226 HTR3BO95264 441 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 GARTP22102 1010 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 HS2ST1Q7LGA3 356 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 FBXO27Q8NI29 283 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 PPP1R13LQ8WUF5 828 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 UBE2FQ969M7 185 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 ZSWIM5Q9P217 1185 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 KLHL3Q9UH77 587 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 GGT7Q9UJ14 662 aa6.93□□□□□ -1.3
UFD1-207ENST00000474226 ZNF16P17020 682 aaPredicted RBP6.92□□□□□ -1.3
UFD1-207ENST00000474226 EIF4A3P38919 411 aaKnown RBP6.92□□□□□ -1.3
UFD1-207ENST00000474226 HSPA2P54652 639 aa6.92□□□□□ -1.3
UFD1-207ENST00000474226 SLFN12Q8IYM2 578 aa6.92□□□□□ -1.3
UFD1-207ENST00000474226 FLAD1Q8NFF5 587 aa6.92□□□□□ -1.3
UFD1-207ENST00000474226 PIWIL2Q8TC59 973 aaKnown RBP6.92□□□□□ -1.3
UFD1-207ENST00000474226 FAM168AQ92567 244 aa6.92□□□□□ -1.3
UFD1-207ENST00000474226 SUPT16HQ9Y5B9 1047 aaKnown RBP6.92□□□□□ -1.3
UFD1-207ENST00000474226 EPRSP07814 1512 aaKnown RBP6.91□□□□□ -1.3
UFD1-207ENST00000474226 CFAP43Q8NDM7 1665 aa6.91□□□□□ -1.3
UFD1-207ENST00000474226 TNNI2P48788 182 aa6.91□□□□□ -1.3
UFD1-207ENST00000474226 CWF19L2Q2TBE0 894 aaKnown RBP6.91□□□□□ -1.3
UFD1-207ENST00000474226 OGFOD2Q6N063 350 aa6.91□□□□□ -1.3
UFD1-207ENST00000474226 Q96M66 194 aa6.91□□□□□ -1.3
UFD1-207ENST00000474226 KCNQ5Q9NR82 932 aa6.91□□□□□ -1.3
UFD1-207ENST00000474226 ROBO2Q9HCK4 1378 aa6.91□□□□□ -1.3
UFD1-207ENST00000474226 CARMIL2Q6F5E8 1435 aa6.91□□□□□ -1.3
UFD1-207ENST00000474226 SHROOM2Q13796 1616 aa6.9□□□□□ -1.3
UFD1-207ENST00000474226 CHURC1-FNTBB4DL54 471 aa6.9□□□□□ -1.3
UFD1-207ENST00000474226 MLECQ14165 292 aa6.9□□□□□ -1.3
UFD1-207ENST00000474226 PHACTR4Q8IZ21 702 aa6.9□□□□□ -1.3
UFD1-207ENST00000474226 TMEM87AQ8NBN3 555 aa6.9□□□□□ -1.3
UFD1-207ENST00000474226 ZNF296Q8WUU4 475 aaPredicted RBP6.9□□□□□ -1.3
UFD1-207ENST00000474226 KCNH3Q9ULD8 1083 aa6.9□□□□□ -1.3
UFD1-207ENST00000474226 CTNND2Q9UQB3 1225 aa6.9□□□□□ -1.3
UFD1-207ENST00000474226 RRBP1Q9P2E9 1410 aaKnown RBP6.9□□□□□ -1.31
UFD1-207ENST00000474226 LRRIQ1Q96JM4 1722 aa6.9□□□□□ -1.31
UFD1-207ENST00000474226 GREM1O60565 184 aa6.89□□□□□ -1.31
UFD1-207ENST00000474226 MFAP1P55081 439 aaKnown RBP6.89□□□□□ -1.31
UFD1-207ENST00000474226 TMPRSS7Q7RTY8 843 aa6.89□□□□□ -1.31
UFD1-207ENST00000474226 HOMEZQ8IX15 550 aa6.89□□□□□ -1.31
UFD1-207ENST00000474226 RNF141Q8WVD5 230 aa6.89□□□□□ -1.31
UFD1-207ENST00000474226 CCDC74BQ96LY2 380 aa6.89□□□□□ -1.31
UFD1-207ENST00000474226 LRRC3Q9BY71 257 aa6.89□□□□□ -1.31
UFD1-207ENST00000474226 BRMS1Q9HCU9 246 aa6.89□□□□□ -1.31
UFD1-207ENST00000474226 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.89□□□□□ -1.31
UFD1-207ENST00000474226 ABCA8O94911 1581 aa6.89□□□□□ -1.31
UFD1-207ENST00000474226 PPRC1Q5VV67 1664 aaKnown RBP6.88□□□□□ -1.31
UFD1-207ENST00000474226 HECW1Q76N89 1606 aa6.88□□□□□ -1.31
UFD1-207ENST00000474226 PTPRGP23470 1445 aa6.88□□□□□ -1.31
UFD1-207ENST00000474226 DNAJA2O60884 412 aa6.88□□□□□ -1.31
UFD1-207ENST00000474226 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
UFD1-207ENST00000474226 DTWD2Q8NBA8 298 aa6.88□□□□□ -1.31
UFD1-207ENST00000474226 BAHD1Q8TBE0 780 aaPredicted RBP6.88□□□□□ -1.31
UFD1-207ENST00000474226 TRIT1Q9H3H1 467 aaKnown RBP6.88□□□□□ -1.31
UFD1-207ENST00000474226 ADAMTS1Q9UHI8 967 aa6.88□□□□□ -1.31
UFD1-207ENST00000474226 PCDHB14Q9Y5E9 798 aa6.88□□□□□ -1.31
UFD1-207ENST00000474226 RAPGEF6Q8TEU7 1601 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms