RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ZYXQ15942 572 aaKnown RBP22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 DGKHQ86XP1 1220 aa22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 MB21D2Q8IYB1 491 aaPredicted RBP22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 RASEFQ8IZ41 740 aa22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 MTA3Q9BTC8 594 aa22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 BEGAINQ9BUH8 593 aa22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 CFHR5Q9BXR6 569 aa22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 STX8Q9UNK0 236 aa22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 CYB5R4Q7L1T6 521 aa22.35■■□□□ 1.17
CTDSP1-207ENST00000473420 ZSCAN10Q96SZ4 725 aaPredicted RBP22.35■■□□□ 1.17
CTDSP1-207ENST00000473420 UBAC1Q9BSL1 405 aa22.35■■□□□ 1.17
CTDSP1-207ENST00000473420 SNX14Q9Y5W7 946 aa22.35■■□□□ 1.17
CTDSP1-207ENST00000473420 PARP14Q460N5 1801 aa22.35■■□□□ 1.17
CTDSP1-207ENST00000473420 PDHXO00330 501 aa22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 VCAM1P19320 739 aa22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 HOXA7P31268 230 aaPredicted RBP22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 DGKZQ13574 1117 aa22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 TREML2Q5T2D2 321 aa22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 RCSD1Q6JBY9 416 aa22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 GMCL1P1Q8NEA9 526 aa22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 ANKS1AQ92625 1134 aa22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 RNF186Q9NXI6 227 aa22.34■■□□□ 1.17
CTDSP1-207ENST00000473420 TNKSO95271 1327 aa22.33■■□□□ 1.17
CTDSP1-207ENST00000473420 WDR46O15213 610 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-207ENST00000473420 SEC24BO95487 1268 aa22.33■■□□□ 1.17
CTDSP1-207ENST00000473420 TOP1P11387 765 aaKnown RBP22.33■■□□□ 1.17
CTDSP1-207ENST00000473420 MCM5P33992 734 aa22.33■■□□□ 1.17
CTDSP1-207ENST00000473420 NEK1Q96PY6 1258 aa22.33■■□□□ 1.17
CTDSP1-207ENST00000473420 ZKSCAN3Q9BRR0 538 aa22.33■■□□□ 1.17
CTDSP1-207ENST00000473420 PNMA3Q9UL41 463 aa22.33■■□□□ 1.17
CTDSP1-207ENST00000473420 WDR19Q8NEZ3 1342 aa22.32■■□□□ 1.16
CTDSP1-207ENST00000473420 HMGB1P09429 215 aaKnown RBP22.32■■□□□ 1.16
CTDSP1-207ENST00000473420 SART3Q15020 963 aaKnown RBP22.32■■□□□ 1.16
CTDSP1-207ENST00000473420 TAF1CQ15572 869 aaPredicted RBP22.32■■□□□ 1.16
CTDSP1-207ENST00000473420 ENAHQ8N8S7 591 aaPredicted RBP22.32■■□□□ 1.16
CTDSP1-207ENST00000473420 TMEM47Q9BQJ4 181 aa22.32■■□□□ 1.16
CTDSP1-207ENST00000473420 ERICH2A1L162 156 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L15C9J2P7 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L13C9JLJ4 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L11C9JVI0 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L18D6R9N7 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L22D6RA61 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L17D6RBQ6 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L19D6RCP7 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L20D6RJB6 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 F5H6K3 240 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 OSBPP22059 807 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 ANTXR2P58335 489 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 KLRC3Q07444 240 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 USP17L24Q0WX57 530 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 SEC23AQ15436 765 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 ADCK5Q3MIX3 580 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 KIAA1755Q5JYT7 1200 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 LRRC47Q8N1G4 583 aaKnown RBP22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 PARK7Q99497 189 aaKnown RBP22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 ZFYVE28Q9HCC9 887 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 RLFQ13129 1914 aa22.31■■□□□ 1.16
CTDSP1-207ENST00000473420 TRPA1O75762 1119 aa22.3■■□□□ 1.16
CTDSP1-207ENST00000473420 NDUFB10O96000 172 aa22.3■■□□□ 1.16
CTDSP1-207ENST00000473420 ANAPC15P60006 121 aa22.3■■□□□ 1.16
CTDSP1-207ENST00000473420 CATSPERGQ6ZRH7 1159 aa22.3■■□□□ 1.16
CTDSP1-207ENST00000473420 GMCL1Q96IK5 515 aa22.3■■□□□ 1.16
CTDSP1-207ENST00000473420 TMEM87BQ96K49 555 aa22.3■■□□□ 1.16
CTDSP1-207ENST00000473420 RPAP3Q9H6T3 665 aaPredicted RBP22.3■■□□□ 1.16
CTDSP1-207ENST00000473420 IFIT3O14879 490 aaKnown RBP22.29■■□□□ 1.16
CTDSP1-207ENST00000473420 PRC1O43663 620 aa22.29■■□□□ 1.16
CTDSP1-207ENST00000473420 PSMA5P28066 241 aa22.29■■□□□ 1.16
CTDSP1-207ENST00000473420 IFIT1BQ5T764 474 aaKnown RBP22.29■■□□□ 1.16
CTDSP1-207ENST00000473420 SPICE1Q8N0Z3 855 aa22.29■■□□□ 1.16
CTDSP1-207ENST00000473420 ASCC2Q9H1I8 757 aaPredicted RBP22.29■■□□□ 1.16
CTDSP1-207ENST00000473420 KAT14Q9H8E8 782 aa22.29■■□□□ 1.16
CTDSP1-207ENST00000473420 A0A0G2JMZ2 1700 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 RAD21O60216 631 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 IRX3P78415 501 aaPredicted RBP22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 CRHR2Q13324 411 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 WTAPQ15007 396 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 SLFN13Q68D06 897 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 DHX32Q7L7V1 743 aaKnown RBP22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 CHST3Q7LGC8 479 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 IGDCC4Q8TDY8 1250 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 IL17RAQ96F46 866 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 JAKMIP1Q96N16 626 aaKnown RBP22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 ADGRA2Q96PE1 1338 aa22.28■■□□□ 1.16
CTDSP1-207ENST00000473420 TLR2O60603 784 aa22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 HSPA1AP0DMV8 641 aaKnown RBP22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 HSPA1BP0DMV9 641 aaKnown RBP22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 EXOSC10Q01780 885 aaKnown RBP22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 NOM1Q5C9Z4 860 aaKnown RBP22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 TMEM67Q5HYA8 995 aa22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 PNMA1Q8ND90 353 aa22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 GTF3C2Q8WUA4 911 aaPredicted RBP22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 DCAF4Q8WV16 495 aa22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 TM6SF1Q9BZW5 370 aa22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 MYPNQ86TC9 1320 aa22.27■■□□□ 1.16
CTDSP1-207ENST00000473420 SH2B2O14492 632 aaPredicted RBP22.26■■□□□ 1.15
CTDSP1-207ENST00000473420 CYP2C8P10632 490 aa22.26■■□□□ 1.15
CTDSP1-207ENST00000473420 LIFRP42702 1097 aa22.26■■□□□ 1.15
CTDSP1-207ENST00000473420 COL9A3Q14050 684 aaPredicted RBP22.26■■□□□ 1.15
CTDSP1-207ENST00000473420 FAM83BQ5T0W9 1011 aa22.26■■□□□ 1.15
CTDSP1-207ENST00000473420 BLOC1S2Q6QNY1 142 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms