RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PTCH2Q9Y6C5 1203 aa7.21□□□□□ -1.26
RTF1-203ENST00000473214 KIAA0556O60303 1618 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 IRS4O14654 1257 aaPredicted RBP7.2□□□□□ -1.26
RTF1-203ENST00000473214 OPLAHO14841 1288 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 TRIM37O94972 964 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 RPN1P04843 607 aaKnown RBP7.2□□□□□ -1.26
RTF1-203ENST00000473214 TGFB3P10600 412 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 IGFBP4P22692 258 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 SOX9P48436 509 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 DDR2Q16832 855 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 MTERF2Q49AM1 385 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 TNNI3KQ59H18 835 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 NXNQ6DKJ4 435 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 RAB44Q7Z6P3 723 aaPredicted RBP7.2□□□□□ -1.26
RTF1-203ENST00000473214 HSCBQ8IWL3 235 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 NIM1KQ8IY84 436 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 CLASRPQ8N2M8 674 aaKnown RBP7.2□□□□□ -1.26
RTF1-203ENST00000473214 RTFDC1Q9BY42 306 aaPredicted RBP7.2□□□□□ -1.26
RTF1-203ENST00000473214 BRD7Q9NPI1 651 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 STIM2Q9P246 746 aa7.2□□□□□ -1.26
RTF1-203ENST00000473214 C9orf172C9J069 976 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 PRPF3O43395 683 aaKnown RBP7.19□□□□□ -1.26
RTF1-203ENST00000473214 PIP5K1CO60331 668 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 NBNO60934 754 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 TRIM27P14373 513 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 SELPP16109 830 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 HTR3AP46098 478 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 NEXNQ0ZGT2 675 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 BIRC3Q13489 604 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 ADGRE1Q14246 886 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 ARMC3Q5W041 872 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 ANKRD23Q86SG2 305 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 SKAP1Q86WV1 359 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 GJD3Q8N144 294 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 MAGEB6Q8N7X4 407 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 HOOK2Q96ED9 719 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 LGR6Q9HBX8 967 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 ANKIB1Q9P2G1 1089 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 ADAMTS1Q9UHI8 967 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 POLIQ9UNA4 740 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 MAPK8IP1Q9UQF2 711 aa7.19□□□□□ -1.26
RTF1-203ENST00000473214 ARHGEF40Q8TER5 1519 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 E2F8A0AVK6 867 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 VSTM5A8MXK1 200 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 M0R2N6 131 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 DIAPH1O60610 1272 aaKnown RBP7.18□□□□□ -1.26
RTF1-203ENST00000473214 PDE8AO60658 829 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 LILRB5O75023 590 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 MTA2O94776 668 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 ELNP15502 786 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
RTF1-203ENST00000473214 TYRO3Q06418 890 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 ORC1Q13415 861 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 PDE1CQ14123 709 aaPredicted RBP7.18□□□□□ -1.26
RTF1-203ENST00000473214 MBTPS1Q14703 1052 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.18□□□□□ -1.26
RTF1-203ENST00000473214 FAM133BQ5BKY9 247 aaKnown RBP7.18□□□□□ -1.26
RTF1-203ENST00000473214 USPL1Q5W0Q7 1092 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 PPP4R3AQ6IN85 833 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 PASD1Q8IV76 773 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 KIAA1958Q8N8K9 716 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 MTMR8Q96EF0 704 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 TRMT2BQ96GJ1 504 aaKnown RBP7.18□□□□□ -1.26
RTF1-203ENST00000473214 HSH2DQ96JZ2 352 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.18□□□□□ -1.26
RTF1-203ENST00000473214 OBP2AQ9NY56 170 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 PFDN2Q9UHV9 154 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 ZNF180Q9UJW8 692 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 KCNH4Q9UQ05 1017 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 KDM2BQ8NHM5 1336 aa7.18□□□□□ -1.26
RTF1-203ENST00000473214 LTBP4Q8N2S1 1624 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 KAT6BQ8WYB5 2073 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 A0A0A0MRY4 1105 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 hCG_1984214I3L0E3 225 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 EIF1AYO14602 144 aaKnown RBP7.17□□□□□ -1.26
RTF1-203ENST00000473214 ORC4O43929 436 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 SERPINB3P29508 390 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 TAF11Q15544 211 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 SPECC1Q5M775 1068 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 TRAPPC3LQ5T215 181 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 TTLL5Q6EMB2 1281 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 MAATS1Q7Z4T9 603 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 ZBTB46Q86UZ6 589 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 ATCAYQ86WG3 371 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 IFNL2Q8IZJ0 200 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 ZNF280CQ8ND82 737 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 SCG3Q8WXD2 468 aaKnown RBP7.17□□□□□ -1.26
RTF1-203ENST00000473214 NINJ1Q92982 152 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 LENG1Q96BZ8 264 aaPredicted RBP7.17□□□□□ -1.26
RTF1-203ENST00000473214 TIFAQ96CG3 184 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 STRBPQ96SI9 672 aaKnown RBP7.17□□□□□ -1.26
RTF1-203ENST00000473214 ELAC2Q9BQ52 826 aaKnown RBP7.17□□□□□ -1.26
RTF1-203ENST00000473214 TSPAN10Q9H1Z9 355 aaPredicted RBP7.17□□□□□ -1.26
RTF1-203ENST00000473214 RIC8AQ9NPQ8 531 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 IPPQ9Y573 584 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 MORC2Q9Y6X9 1032 aaPredicted RBP7.17□□□□□ -1.26
RTF1-203ENST00000473214 UGGT2Q9NYU1 1516 aa7.17□□□□□ -1.26
RTF1-203ENST00000473214 ABCA8O94911 1581 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 A0A087X0B3 334 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms